RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
LYSMD2-202ENST00000454181 TNP1P09430 55 aa8.13□□□□□ -1.11
LYSMD2-202ENST00000454181 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
LYSMD2-202ENST00000454181 SMIM26A0A096LP01 95 aa8.12□□□□□ -1.11
LYSMD2-202ENST00000454181 KRTAP4-2Q9BYR5 136 aa8.11□□□□□ -1.11
LYSMD2-202ENST00000454181 KRTAP5-7Q6L8G8 165 aa8.06□□□□□ -1.12
LYSMD2-202ENST00000454181 KRTAP5-3Q6L8H2 238 aa8.04□□□□□ -1.12
LYSMD2-202ENST00000454181 KRTAP4-11Q9BYQ6 195 aa8□□□□□ -1.13
LYSMD2-202ENST00000454181 A8MU10 97 aa7.99□□□□□ -1.13
LYSMD2-202ENST00000454181 A0A1B0GU69 56 aa7.98□□□□□ -1.13
LYSMD2-202ENST00000454181 KRTAP20-2Q3LI61 65 aa7.91□□□□□ -1.14
LYSMD2-202ENST00000454181 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
LYSMD2-202ENST00000454181 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
LYSMD2-202ENST00000454181 COX7CP15954 63 aa7.81□□□□□ -1.16
LYSMD2-202ENST00000454181 KRTAP12-4P60329 112 aa7.81□□□□□ -1.16
LYSMD2-202ENST00000454181 H7BZZ5 65 aa7.78□□□□□ -1.16
LYSMD2-202ENST00000454181 KRTAP5-5Q701N2 237 aaPredicted RBP7.76□□□□□ -1.17
LYSMD2-202ENST00000454181 H3BS24 57 aa7.71□□□□□ -1.18
LYSMD2-202ENST00000454181 PRR15LQ9BU68 103 aa7.63□□□□□ -1.19
LYSMD2-202ENST00000454181 SYNE1Q8NF91 8797 aaKnown RBP7.54□□□□□ -1.2
LYSMD2-202ENST00000454181 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
LYSMD2-202ENST00000454181 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
LYSMD2-202ENST00000454181 UQCR11O14957 56 aa7.33□□□□□ -1.24
LYSMD2-202ENST00000454181 ANAPC13Q9BS18 74 aa7.29□□□□□ -1.24
LYSMD2-202ENST00000454181 ATP5EP56381 51 aaPredicted RBP7.25□□□□□ -1.25
LYSMD2-202ENST00000454181 PCP4P48539 62 aa7.21□□□□□ -1.26
LYSMD2-202ENST00000454181 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
LYSMD2-202ENST00000454181 LCE3CQ5T5A8 94 aa7.19□□□□□ -1.26
LYSMD2-202ENST00000454181 KRTAP5-2Q701N4 177 aa7.19□□□□□ -1.26
LYSMD2-202ENST00000454181 SVIPQ8NHG7 77 aa7.19□□□□□ -1.26
LYSMD2-202ENST00000454181 K7ERS5 55 aa7.16□□□□□ -1.26
LYSMD2-202ENST00000454181 MT1AP04731 61 aa7.13□□□□□ -1.27
LYSMD2-202ENST00000454181 CCDC179H3BU77 68 aa7.12□□□□□ -1.27
LYSMD2-202ENST00000454181 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
LYSMD2-202ENST00000454181 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
LYSMD2-202ENST00000454181 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
LYSMD2-202ENST00000454181 KRTAP5-8O75690 187 aa7.07□□□□□ -1.28
LYSMD2-202ENST00000454181 AHNAKQ09666 5890 aaKnown RBP7.01□□□□□ -1.29
LYSMD2-202ENST00000454181 MUC5ACP98088 5654 aa7□□□□□ -1.29
LYSMD2-202ENST00000454181 MUC5BQ9HC84 5762 aaPredicted RBP6.96□□□□□ -1.3
LYSMD2-202ENST00000454181 KRTAP6-2Q3LI66 62 aa6.91□□□□□ -1.3
LYSMD2-202ENST00000454181 OBSCNQ5VST9 7968 aa6.88□□□□□ -1.31
LYSMD2-202ENST00000454181 TMEM258P61165 79 aa6.84□□□□□ -1.31
LYSMD2-202ENST00000454181 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
LYSMD2-202ENST00000454181 PSPHP1O15172 72 aa6.7□□□□□ -1.34
LYSMD2-202ENST00000454181 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
LYSMD2-202ENST00000454181 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
LYSMD2-202ENST00000454181 V9GYY9 64 aa6.65□□□□□ -1.34
LYSMD2-202ENST00000454181 Q1T7F1 81 aa6.61□□□□□ -1.35
LYSMD2-202ENST00000454181 MT3P25713 68 aa6.59□□□□□ -1.35
LYSMD2-202ENST00000454181 KRTAP5-1Q6L8H4 278 aa6.53□□□□□ -1.36
LYSMD2-202ENST00000454181 ROMO1P60602 79 aa6.5□□□□□ -1.37
LYSMD2-202ENST00000454181 A6NED7 52 aa6.47□□□□□ -1.37
LYSMD2-202ENST00000454181 LCE1EQ5T753 118 aa6.13□□□□□ -1.43
LYSMD2-202ENST00000454181 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
LYSMD2-202ENST00000454181 LCE1BQ5T7P3 118 aa5.87□□□□□ -1.47
LYSMD2-202ENST00000454181 LCE1CQ5T751 118 aa5.68□□□□□ -1.5
LYSMD2-202ENST00000454181 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
LYSMD2-202ENST00000454181 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
LYSMD2-202ENST00000454181 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
LYSMD2-202ENST00000454181 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
LYSMD2-202ENST00000454181 KRTAP5-11Q6L8G4 156 aa5.36□□□□□ -1.55
LYSMD2-202ENST00000454181 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
LYSMD2-202ENST00000454181 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
LYSMD2-202ENST00000454181 PHGR1C9JFL3 82 aa4.92□□□□□ -1.62
LYSMD2-202ENST00000454181 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
LYSMD2-202ENST00000454181 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
LYSMD2-202ENST00000454181 KRTAP21-2Q3LI59 83 aa4.67□□□□□ -1.66
LYSMD2-202ENST00000454181 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
LYSMD2-202ENST00000454181 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
LYSMD2-202ENST00000454181 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
LYSMD2-202ENST00000454181 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
LYSMD2-202ENST00000454181 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
LYSMD2-202ENST00000454181 INE1O15225 51 aa3.8□□□□□ -1.8
LYSMD2-202ENST00000454181 KRTAP21-1Q3LI58 79 aa3.74□□□□□ -1.81
LYSMD2-202ENST00000454181 PRM1P04553 51 aa3.28□□□□□ -1.88
LYSMD2-202ENST00000454181 MUC16Q8WXI7 14507 aa3.02□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms