RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
MDH1-208ENST00000454035 MT1XP80297 61 aa2.47□□□□□ -2.01
MDH1-208ENST00000454035 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
MDH1-208ENST00000454035 COA5Q86WW8 74 aa2.46□□□□□ -2.02
MDH1-208ENST00000454035 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
MDH1-208ENST00000454035 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
MDH1-208ENST00000454035 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
MDH1-208ENST00000454035 SPRR2EP22531 72 aa2.41□□□□□ -2.02
MDH1-208ENST00000454035 SPRR2BP35325 72 aa2.41□□□□□ -2.02
MDH1-208ENST00000454035 SPRR2AP35326 72 aa2.41□□□□□ -2.02
MDH1-208ENST00000454035 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
MDH1-208ENST00000454035 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
MDH1-208ENST00000454035 A0A1B0GU33 70 aa2.4□□□□□ -2.03
MDH1-208ENST00000454035 CCDC179H3BU77 68 aa2.4□□□□□ -2.03
MDH1-208ENST00000454035 KMT2DO14686 5537 aa2.39□□□□□ -2.03
MDH1-208ENST00000454035 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
MDH1-208ENST00000454035 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
MDH1-208ENST00000454035 SERP1Q9Y6X1 66 aa2.38□□□□□ -2.03
MDH1-208ENST00000454035 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
MDH1-208ENST00000454035 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
MDH1-208ENST00000454035 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
MDH1-208ENST00000454035 SPRR2DP22532 72 aa2.33□□□□□ -2.04
MDH1-208ENST00000454035 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
MDH1-208ENST00000454035 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
MDH1-208ENST00000454035 A0A1B0GU69 56 aa2.32□□□□□ -2.04
MDH1-208ENST00000454035 A0A0D9SG42 100 aa2.31□□□□□ -2.04
MDH1-208ENST00000454035 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
MDH1-208ENST00000454035 TMEM258P61165 79 aa2.31□□□□□ -2.04
MDH1-208ENST00000454035 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
MDH1-208ENST00000454035 LINC01558Q9Y6Z2 57 aa2.29□□□□□ -2.04
MDH1-208ENST00000454035 PRR15LQ9BU68 103 aa2.27□□□□□ -2.05
MDH1-208ENST00000454035 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
MDH1-208ENST00000454035 UQCR11O14957 56 aa2.21□□□□□ -2.06
MDH1-208ENST00000454035 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
MDH1-208ENST00000454035 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
MDH1-208ENST00000454035 Q1T7F1 81 aa2.19□□□□□ -2.06
MDH1-208ENST00000454035 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
MDH1-208ENST00000454035 MT1EP04732 61 aa2.18□□□□□ -2.06
MDH1-208ENST00000454035 TNP1P09430 55 aa2.17□□□□□ -2.06
MDH1-208ENST00000454035 MIR22HGQ0VDD5 57 aa2.16□□□□□ -2.06
MDH1-208ENST00000454035 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
MDH1-208ENST00000454035 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
MDH1-208ENST00000454035 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
MDH1-208ENST00000454035 RPS28P62857 69 aaKnown RBP2.13□□□□□ -2.07
MDH1-208ENST00000454035 MT1GP13640 62 aa2.12□□□□□ -2.07
MDH1-208ENST00000454035 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
MDH1-208ENST00000454035 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.07
MDH1-208ENST00000454035 MT1LQ93083 61 aa2.09□□□□□ -2.07
MDH1-208ENST00000454035 MT4P47944 62 aa2.08□□□□□ -2.08
MDH1-208ENST00000454035 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
MDH1-208ENST00000454035 PP632Q6XCG6 107 aa2.07□□□□□ -2.08
MDH1-208ENST00000454035 MT1MQ8N339 61 aa2.07□□□□□ -2.08
MDH1-208ENST00000454035 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
MDH1-208ENST00000454035 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
MDH1-208ENST00000454035 CDC42SE1Q9NRR8 79 aa2.01□□□□□ -2.09
MDH1-208ENST00000454035 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
MDH1-208ENST00000454035 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
MDH1-208ENST00000454035 ROMO1P60602 79 aa1.98□□□□□ -2.09
MDH1-208ENST00000454035 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
MDH1-208ENST00000454035 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
MDH1-208ENST00000454035 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
MDH1-208ENST00000454035 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
MDH1-208ENST00000454035 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.12
MDH1-208ENST00000454035 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
MDH1-208ENST00000454035 BRK1Q8WUW1 75 aa1.83□□□□□ -2.12
MDH1-208ENST00000454035 MT1AP04731 61 aa1.78□□□□□ -2.12
MDH1-208ENST00000454035 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
MDH1-208ENST00000454035 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
MDH1-208ENST00000454035 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
MDH1-208ENST00000454035 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
MDH1-208ENST00000454035 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
MDH1-208ENST00000454035 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
MDH1-208ENST00000454035 INE1O15225 51 aa1.64□□□□□ -2.15
MDH1-208ENST00000454035 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
MDH1-208ENST00000454035 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
MDH1-208ENST00000454035 PRM1P04553 51 aa1.01□□□□□ -2.25
MDH1-208ENST00000454035 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
MDH1-208ENST00000454035 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 51.4 ms