RNA–Protein interactions for RNA: ENST00000453133.1

USP34-204, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-204ENST00000453133 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
USP34-204ENST00000453133 S4R3F8 94 aa2.41□□□□□ -2.02
USP34-204ENST00000453133 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
USP34-204ENST00000453133 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
USP34-204ENST00000453133 LRP2P98164 4655 aa2.36□□□□□ -2.03
USP34-204ENST00000453133 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
USP34-204ENST00000453133 LPAP08519 4548 aa2.35□□□□□ -2.03
USP34-204ENST00000453133 A0A0D9SG42 100 aa2.34□□□□□ -2.04
USP34-204ENST00000453133 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
USP34-204ENST00000453133 M0QZ58 72 aa2.32□□□□□ -2.04
USP34-204ENST00000453133 MUC17Q685J3 4493 aa2.31□□□□□ -2.04
USP34-204ENST00000453133 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
USP34-204ENST00000453133 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.04
USP34-204ENST00000453133 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
USP34-204ENST00000453133 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
USP34-204ENST00000453133 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
USP34-204ENST00000453133 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
USP34-204ENST00000453133 MUC2Q02817 5179 aa2.22□□□□□ -2.05
USP34-204ENST00000453133 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
USP34-204ENST00000453133 FAT4Q6V0I7 4981 aa2.18□□□□□ -2.06
USP34-204ENST00000453133 KRTAP19-2Q3LHN2 52 aa2.17□□□□□ -2.06
USP34-204ENST00000453133 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
USP34-204ENST00000453133 M0R2T5 61 aa2.16□□□□□ -2.06
USP34-204ENST00000453133 MT1HP80294 61 aa2.15□□□□□ -2.07
USP34-204ENST00000453133 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
USP34-204ENST00000453133 MT2AP02795 61 aa2.04□□□□□ -2.08
USP34-204ENST00000453133 MT1FP04733 61 aa2.03□□□□□ -2.08
USP34-204ENST00000453133 TNP1P09430 55 aa2.03□□□□□ -2.08
USP34-204ENST00000453133 CRCT1Q9UGL9 99 aa1.99□□□□□ -2.09
USP34-204ENST00000453133 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
USP34-204ENST00000453133 SPRR2GQ9BYE4 73 aa1.95□□□□□ -2.1
USP34-204ENST00000453133 USH2AO75445 5202 aa1.91□□□□□ -2.1
USP34-204ENST00000453133 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
USP34-204ENST00000453133 MT1BP07438 61 aa1.9□□□□□ -2.11
USP34-204ENST00000453133 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
USP34-204ENST00000453133 SSPOA2VEC9 5147 aa1.88□□□□□ -2.11
USP34-204ENST00000453133 MT1XP80297 61 aa1.83□□□□□ -2.12
USP34-204ENST00000453133 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
USP34-204ENST00000453133 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
USP34-204ENST00000453133 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
USP34-204ENST00000453133 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
USP34-204ENST00000453133 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
USP34-204ENST00000453133 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
USP34-204ENST00000453133 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
USP34-204ENST00000453133 NEBP20929 6669 aa1.76□□□□□ -2.13
USP34-204ENST00000453133 KMT2DO14686 5537 aa1.67□□□□□ -2.14
USP34-204ENST00000453133 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.15
USP34-204ENST00000453133 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
USP34-204ENST00000453133 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
USP34-204ENST00000453133 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
USP34-204ENST00000453133 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
USP34-204ENST00000453133 MT1EP04732 61 aa1.6□□□□□ -2.15
USP34-204ENST00000453133 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
USP34-204ENST00000453133 SPRR2EP22531 72 aa1.57□□□□□ -2.16
USP34-204ENST00000453133 SPRR2BP35325 72 aa1.57□□□□□ -2.16
USP34-204ENST00000453133 SPRR2AP35326 72 aa1.57□□□□□ -2.16
USP34-204ENST00000453133 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
USP34-204ENST00000453133 MT1LQ93083 61 aa1.57□□□□□ -2.16
USP34-204ENST00000453133 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
USP34-204ENST00000453133 MT1GP13640 62 aa1.53□□□□□ -2.16
USP34-204ENST00000453133 SPRR2DP22532 72 aa1.52□□□□□ -2.17
USP34-204ENST00000453133 MT1MQ8N339 61 aa1.51□□□□□ -2.17
USP34-204ENST00000453133 DSTQ03001 7570 aaKnown RBP1.48□□□□□ -2.17
USP34-204ENST00000453133 MT1AP04731 61 aa1.46□□□□□ -2.18
USP34-204ENST00000453133 PRM1P04553 51 aa1.39□□□□□ -2.19
USP34-204ENST00000453133 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
USP34-204ENST00000453133 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
USP34-204ENST00000453133 MT4P47944 62 aa1.33□□□□□ -2.2
USP34-204ENST00000453133 KRTAP6-1Q3LI64 71 aa1.32□□□□□ -2.2
USP34-204ENST00000453133 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
USP34-204ENST00000453133 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
USP34-204ENST00000453133 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
USP34-204ENST00000453133 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
USP34-204ENST00000453133 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
USP34-204ENST00000453133 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
USP34-204ENST00000453133 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
USP34-204ENST00000453133 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
USP34-204ENST00000453133 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms