RNA–Protein interactions for RNA: ENST00000452576.6

VWDE-203, Transcript of von Willebrand factor D and EGF domains, humanhuman

TSL 1 (best)

Gene VWDE, Length 5,936 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWDE-203ENST00000452576 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
VWDE-203ENST00000452576 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
VWDE-203ENST00000452576 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
VWDE-203ENST00000452576 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
VWDE-203ENST00000452576 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
VWDE-203ENST00000452576 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
VWDE-203ENST00000452576 LPAP08519 4548 aa3.54□□□□□ -1.84
VWDE-203ENST00000452576 PKHD1P08F94 4074 aa3.5□□□□□ -1.85
VWDE-203ENST00000452576 MT1AP04731 61 aa3.47□□□□□ -1.85
VWDE-203ENST00000452576 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
VWDE-203ENST00000452576 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
VWDE-203ENST00000452576 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
VWDE-203ENST00000452576 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
VWDE-203ENST00000452576 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
VWDE-203ENST00000452576 KMT2CQ8NEZ4 4911 aaKnown RBP3.41□□□□□ -1.86
VWDE-203ENST00000452576 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.86
VWDE-203ENST00000452576 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
VWDE-203ENST00000452576 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
VWDE-203ENST00000452576 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
VWDE-203ENST00000452576 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
VWDE-203ENST00000452576 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
VWDE-203ENST00000452576 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
VWDE-203ENST00000452576 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
VWDE-203ENST00000452576 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
VWDE-203ENST00000452576 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
VWDE-203ENST00000452576 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
VWDE-203ENST00000452576 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
VWDE-203ENST00000452576 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
VWDE-203ENST00000452576 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
VWDE-203ENST00000452576 MUC17Q685J3 4493 aa3.3□□□□□ -1.88
VWDE-203ENST00000452576 TNXBP22105 4242 aa3.28□□□□□ -1.88
VWDE-203ENST00000452576 MUC2Q02817 5179 aa3.26□□□□□ -1.89
VWDE-203ENST00000452576 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
VWDE-203ENST00000452576 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
VWDE-203ENST00000452576 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
VWDE-203ENST00000452576 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
VWDE-203ENST00000452576 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
VWDE-203ENST00000452576 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
VWDE-203ENST00000452576 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
VWDE-203ENST00000452576 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
VWDE-203ENST00000452576 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
VWDE-203ENST00000452576 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
VWDE-203ENST00000452576 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
VWDE-203ENST00000452576 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
VWDE-203ENST00000452576 NEBP20929 6669 aa2.85□□□□□ -1.95
VWDE-203ENST00000452576 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
VWDE-203ENST00000452576 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
VWDE-203ENST00000452576 USH2AO75445 5202 aa2.78□□□□□ -1.96
VWDE-203ENST00000452576 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
VWDE-203ENST00000452576 KMT2DO14686 5537 aa2.73□□□□□ -1.97
VWDE-203ENST00000452576 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
VWDE-203ENST00000452576 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
VWDE-203ENST00000452576 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
VWDE-203ENST00000452576 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
VWDE-203ENST00000452576 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
VWDE-203ENST00000452576 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
VWDE-203ENST00000452576 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
VWDE-203ENST00000452576 SSPOA2VEC9 5147 aa2.53□□□□□ -2
VWDE-203ENST00000452576 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
VWDE-203ENST00000452576 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
VWDE-203ENST00000452576 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
VWDE-203ENST00000452576 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
VWDE-203ENST00000452576 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
VWDE-203ENST00000452576 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
VWDE-203ENST00000452576 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
VWDE-203ENST00000452576 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
VWDE-203ENST00000452576 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
VWDE-203ENST00000452576 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
VWDE-203ENST00000452576 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
VWDE-203ENST00000452576 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
VWDE-203ENST00000452576 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
VWDE-203ENST00000452576 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
VWDE-203ENST00000452576 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
VWDE-203ENST00000452576 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
VWDE-203ENST00000452576 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
VWDE-203ENST00000452576 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
VWDE-203ENST00000452576 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
VWDE-203ENST00000452576 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms