RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 TNP1P09430 55 aa4.26□□□□□ -1.73
HDLBP-224ENST00000452065 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
HDLBP-224ENST00000452065 SPRR2EP22531 72 aa4.2□□□□□ -1.74
HDLBP-224ENST00000452065 SPRR2BP35325 72 aa4.2□□□□□ -1.74
HDLBP-224ENST00000452065 SPRR2AP35326 72 aa4.2□□□□□ -1.74
HDLBP-224ENST00000452065 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
HDLBP-224ENST00000452065 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
HDLBP-224ENST00000452065 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
HDLBP-224ENST00000452065 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
HDLBP-224ENST00000452065 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
HDLBP-224ENST00000452065 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
HDLBP-224ENST00000452065 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
HDLBP-224ENST00000452065 MT1EP04732 61 aa4.11□□□□□ -1.75
HDLBP-224ENST00000452065 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
HDLBP-224ENST00000452065 SPRR2DP22532 72 aa4.06□□□□□ -1.76
HDLBP-224ENST00000452065 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
HDLBP-224ENST00000452065 ROMO1P60602 79 aa4.05□□□□□ -1.76
HDLBP-224ENST00000452065 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
HDLBP-224ENST00000452065 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
HDLBP-224ENST00000452065 KRTAP12-3P60328 96 aa4□□□□□ -1.77
HDLBP-224ENST00000452065 MT1GP13640 62 aa3.99□□□□□ -1.77
HDLBP-224ENST00000452065 MT1LQ93083 61 aa3.97□□□□□ -1.77
HDLBP-224ENST00000452065 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
HDLBP-224ENST00000452065 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
HDLBP-224ENST00000452065 MT1MQ8N339 61 aa3.9□□□□□ -1.79
HDLBP-224ENST00000452065 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
HDLBP-224ENST00000452065 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
HDLBP-224ENST00000452065 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
HDLBP-224ENST00000452065 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
HDLBP-224ENST00000452065 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
HDLBP-224ENST00000452065 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
HDLBP-224ENST00000452065 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
HDLBP-224ENST00000452065 SVIPQ8NHG7 77 aa3.72□□□□□ -1.81
HDLBP-224ENST00000452065 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
HDLBP-224ENST00000452065 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
HDLBP-224ENST00000452065 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
HDLBP-224ENST00000452065 MT4P47944 62 aa3.6□□□□□ -1.83
HDLBP-224ENST00000452065 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
HDLBP-224ENST00000452065 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
HDLBP-224ENST00000452065 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
HDLBP-224ENST00000452065 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
HDLBP-224ENST00000452065 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
HDLBP-224ENST00000452065 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
HDLBP-224ENST00000452065 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
HDLBP-224ENST00000452065 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
HDLBP-224ENST00000452065 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
HDLBP-224ENST00000452065 MT1AP04731 61 aa3.39□□□□□ -1.87
HDLBP-224ENST00000452065 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
HDLBP-224ENST00000452065 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
HDLBP-224ENST00000452065 H3BS24 57 aa3.3□□□□□ -1.88
HDLBP-224ENST00000452065 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
HDLBP-224ENST00000452065 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
HDLBP-224ENST00000452065 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
HDLBP-224ENST00000452065 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
HDLBP-224ENST00000452065 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
HDLBP-224ENST00000452065 MT3P25713 68 aa3.1□□□□□ -1.91
HDLBP-224ENST00000452065 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
HDLBP-224ENST00000452065 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
HDLBP-224ENST00000452065 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
HDLBP-224ENST00000452065 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
HDLBP-224ENST00000452065 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
HDLBP-224ENST00000452065 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
HDLBP-224ENST00000452065 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
HDLBP-224ENST00000452065 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
HDLBP-224ENST00000452065 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
HDLBP-224ENST00000452065 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
HDLBP-224ENST00000452065 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
HDLBP-224ENST00000452065 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
HDLBP-224ENST00000452065 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
HDLBP-224ENST00000452065 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
HDLBP-224ENST00000452065 INE1O15225 51 aa2.33□□□□□ -2.04
HDLBP-224ENST00000452065 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
HDLBP-224ENST00000452065 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
HDLBP-224ENST00000452065 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
HDLBP-224ENST00000452065 PRM1P04553 51 aa2.06□□□□□ -2.08
HDLBP-224ENST00000452065 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
HDLBP-224ENST00000452065 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
HDLBP-224ENST00000452065 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms