RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
SEC22C-209ENST00000449617 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
SEC22C-209ENST00000449617 TNP1P09430 55 aa4.65□□□□□ -1.66
SEC22C-209ENST00000449617 MT1MQ8N339 61 aa4.65□□□□□ -1.66
SEC22C-209ENST00000449617 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
SEC22C-209ENST00000449617 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
SEC22C-209ENST00000449617 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
SEC22C-209ENST00000449617 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
SEC22C-209ENST00000449617 TMEM258P61165 79 aa4.53□□□□□ -1.68
SEC22C-209ENST00000449617 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
SEC22C-209ENST00000449617 UQCR11O14957 56 aa4.51□□□□□ -1.69
SEC22C-209ENST00000449617 MT4P47944 62 aa4.51□□□□□ -1.69
SEC22C-209ENST00000449617 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
SEC22C-209ENST00000449617 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
SEC22C-209ENST00000449617 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.69
SEC22C-209ENST00000449617 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
SEC22C-209ENST00000449617 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
SEC22C-209ENST00000449617 KRTAP25-1Q3LHN0 102 aa4.38□□□□□ -1.71
SEC22C-209ENST00000449617 PCP4P48539 62 aa4.36□□□□□ -1.71
SEC22C-209ENST00000449617 K7ERS5 55 aa4.32□□□□□ -1.72
SEC22C-209ENST00000449617 PSPHP1O15172 72 aa4.31□□□□□ -1.72
SEC22C-209ENST00000449617 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
SEC22C-209ENST00000449617 V9GYY9 64 aa4.29□□□□□ -1.72
SEC22C-209ENST00000449617 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
SEC22C-209ENST00000449617 Q1T7F1 81 aa4.26□□□□□ -1.73
SEC22C-209ENST00000449617 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
SEC22C-209ENST00000449617 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
SEC22C-209ENST00000449617 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
SEC22C-209ENST00000449617 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
SEC22C-209ENST00000449617 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
SEC22C-209ENST00000449617 A6NED7 52 aa4.16□□□□□ -1.74
SEC22C-209ENST00000449617 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
SEC22C-209ENST00000449617 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
SEC22C-209ENST00000449617 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.74
SEC22C-209ENST00000449617 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
SEC22C-209ENST00000449617 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
SEC22C-209ENST00000449617 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
SEC22C-209ENST00000449617 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
SEC22C-209ENST00000449617 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
SEC22C-209ENST00000449617 ROMO1P60602 79 aa4.03□□□□□ -1.76
SEC22C-209ENST00000449617 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
SEC22C-209ENST00000449617 MT1AP04731 61 aa3.95□□□□□ -1.78
SEC22C-209ENST00000449617 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
SEC22C-209ENST00000449617 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.78
SEC22C-209ENST00000449617 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.78
SEC22C-209ENST00000449617 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
SEC22C-209ENST00000449617 H3BS24 57 aa3.75□□□□□ -1.81
SEC22C-209ENST00000449617 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
SEC22C-209ENST00000449617 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
SEC22C-209ENST00000449617 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
SEC22C-209ENST00000449617 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SEC22C-209ENST00000449617 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
SEC22C-209ENST00000449617 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
SEC22C-209ENST00000449617 MT3P25713 68 aa3.61□□□□□ -1.83
SEC22C-209ENST00000449617 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
SEC22C-209ENST00000449617 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
SEC22C-209ENST00000449617 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
SEC22C-209ENST00000449617 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
SEC22C-209ENST00000449617 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
SEC22C-209ENST00000449617 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
SEC22C-209ENST00000449617 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
SEC22C-209ENST00000449617 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SEC22C-209ENST00000449617 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
SEC22C-209ENST00000449617 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
SEC22C-209ENST00000449617 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
SEC22C-209ENST00000449617 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
SEC22C-209ENST00000449617 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
SEC22C-209ENST00000449617 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
SEC22C-209ENST00000449617 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SEC22C-209ENST00000449617 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
SEC22C-209ENST00000449617 NDUFAF8A1L188 74 aa2.54□□□□□ -2
SEC22C-209ENST00000449617 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
SEC22C-209ENST00000449617 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SEC22C-209ENST00000449617 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
SEC22C-209ENST00000449617 INE1O15225 51 aa2.19□□□□□ -2.06
SEC22C-209ENST00000449617 PRM1P04553 51 aa2.07□□□□□ -2.08
SEC22C-209ENST00000449617 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SEC22C-209ENST00000449617 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 140.9 ms