RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 PRM1P04553 51 aa3.83□□□□□ -1.8
AC006001.3-201ENST00000449307 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
AC006001.3-201ENST00000449307 LRP2P98164 4655 aa3.83□□□□□ -1.8
AC006001.3-201ENST00000449307 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
AC006001.3-201ENST00000449307 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
AC006001.3-201ENST00000449307 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
AC006001.3-201ENST00000449307 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
AC006001.3-201ENST00000449307 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
AC006001.3-201ENST00000449307 HYDINQ4G0P3 5121 aa3.78□□□□□ -1.8
AC006001.3-201ENST00000449307 KIAA1109Q2LD37 5005 aa3.78□□□□□ -1.8
AC006001.3-201ENST00000449307 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
AC006001.3-201ENST00000449307 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
AC006001.3-201ENST00000449307 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
AC006001.3-201ENST00000449307 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
AC006001.3-201ENST00000449307 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
AC006001.3-201ENST00000449307 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
AC006001.3-201ENST00000449307 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
AC006001.3-201ENST00000449307 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
AC006001.3-201ENST00000449307 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
AC006001.3-201ENST00000449307 MT1AP04731 61 aa3.64□□□□□ -1.83
AC006001.3-201ENST00000449307 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
AC006001.3-201ENST00000449307 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
AC006001.3-201ENST00000449307 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
AC006001.3-201ENST00000449307 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
AC006001.3-201ENST00000449307 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
AC006001.3-201ENST00000449307 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
AC006001.3-201ENST00000449307 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
AC006001.3-201ENST00000449307 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
AC006001.3-201ENST00000449307 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
AC006001.3-201ENST00000449307 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
AC006001.3-201ENST00000449307 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
AC006001.3-201ENST00000449307 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
AC006001.3-201ENST00000449307 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
AC006001.3-201ENST00000449307 MUC2Q02817 5179 aa3.25□□□□□ -1.89
AC006001.3-201ENST00000449307 ABCA13Q86UQ4 5058 aa3.25□□□□□ -1.89
AC006001.3-201ENST00000449307 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
AC006001.3-201ENST00000449307 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
AC006001.3-201ENST00000449307 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
AC006001.3-201ENST00000449307 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.92
AC006001.3-201ENST00000449307 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
AC006001.3-201ENST00000449307 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
AC006001.3-201ENST00000449307 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
AC006001.3-201ENST00000449307 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
AC006001.3-201ENST00000449307 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
AC006001.3-201ENST00000449307 NEBP20929 6669 aa2.87□□□□□ -1.95
AC006001.3-201ENST00000449307 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
AC006001.3-201ENST00000449307 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
AC006001.3-201ENST00000449307 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
AC006001.3-201ENST00000449307 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
AC006001.3-201ENST00000449307 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
AC006001.3-201ENST00000449307 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
AC006001.3-201ENST00000449307 KMT2DO14686 5537 aa2.67□□□□□ -1.98
AC006001.3-201ENST00000449307 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
AC006001.3-201ENST00000449307 USH2AO75445 5202 aa2.63□□□□□ -1.99
AC006001.3-201ENST00000449307 SSPOA2VEC9 5147 aa2.56□□□□□ -2
AC006001.3-201ENST00000449307 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
AC006001.3-201ENST00000449307 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
AC006001.3-201ENST00000449307 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
AC006001.3-201ENST00000449307 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
AC006001.3-201ENST00000449307 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
AC006001.3-201ENST00000449307 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
AC006001.3-201ENST00000449307 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
AC006001.3-201ENST00000449307 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
AC006001.3-201ENST00000449307 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
AC006001.3-201ENST00000449307 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
AC006001.3-201ENST00000449307 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
AC006001.3-201ENST00000449307 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
AC006001.3-201ENST00000449307 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
AC006001.3-201ENST00000449307 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
AC006001.3-201ENST00000449307 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
AC006001.3-201ENST00000449307 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
AC006001.3-201ENST00000449307 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
AC006001.3-201ENST00000449307 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
AC006001.3-201ENST00000449307 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
AC006001.3-201ENST00000449307 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
AC006001.3-201ENST00000449307 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
AC006001.3-201ENST00000449307 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 67.3 ms