RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
USP39-206ENST00000448971 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
USP39-206ENST00000448971 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
USP39-206ENST00000448971 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
USP39-206ENST00000448971 A8MU10 97 aa5.69□□□□□ -1.5
USP39-206ENST00000448971 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
USP39-206ENST00000448971 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
USP39-206ENST00000448971 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
USP39-206ENST00000448971 UQCR11O14957 56 aa5.55□□□□□ -1.52
USP39-206ENST00000448971 MT3P25713 68 aa5.47□□□□□ -1.53
USP39-206ENST00000448971 V9GYY9 64 aa5.46□□□□□ -1.54
USP39-206ENST00000448971 TNP1P09430 55 aa5.44□□□□□ -1.54
USP39-206ENST00000448971 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
USP39-206ENST00000448971 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
USP39-206ENST00000448971 PSPHP1O15172 72 aa5.43□□□□□ -1.54
USP39-206ENST00000448971 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
USP39-206ENST00000448971 MT1EP04732 61 aa5.4□□□□□ -1.54
USP39-206ENST00000448971 Q1T7F1 81 aa5.39□□□□□ -1.55
USP39-206ENST00000448971 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
USP39-206ENST00000448971 KRTAP19-5Q3LI72 72 aa5.37□□□□□ -1.55
USP39-206ENST00000448971 K7ERS5 55 aa5.35□□□□□ -1.55
USP39-206ENST00000448971 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
USP39-206ENST00000448971 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
USP39-206ENST00000448971 A6NED7 52 aa5.27□□□□□ -1.57
USP39-206ENST00000448971 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
USP39-206ENST00000448971 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
USP39-206ENST00000448971 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
USP39-206ENST00000448971 MT1GP13640 62 aa5.2□□□□□ -1.58
USP39-206ENST00000448971 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
USP39-206ENST00000448971 MT1LQ93083 61 aa5.19□□□□□ -1.58
USP39-206ENST00000448971 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
USP39-206ENST00000448971 MT4P47944 62 aa5.16□□□□□ -1.58
USP39-206ENST00000448971 LCE1FQ5T754 118 aa5.14□□□□□ -1.59
USP39-206ENST00000448971 MT1MQ8N339 61 aa5.14□□□□□ -1.59
USP39-206ENST00000448971 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
USP39-206ENST00000448971 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
USP39-206ENST00000448971 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
USP39-206ENST00000448971 CDC42SE1Q9NRR8 79 aa5.07□□□□□ -1.6
USP39-206ENST00000448971 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
USP39-206ENST00000448971 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
USP39-206ENST00000448971 ROMO1P60602 79 aa4.97□□□□□ -1.61
USP39-206ENST00000448971 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
USP39-206ENST00000448971 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
USP39-206ENST00000448971 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
USP39-206ENST00000448971 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
USP39-206ENST00000448971 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
USP39-206ENST00000448971 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
USP39-206ENST00000448971 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
USP39-206ENST00000448971 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
USP39-206ENST00000448971 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
USP39-206ENST00000448971 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
USP39-206ENST00000448971 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
USP39-206ENST00000448971 MT1AP04731 61 aa4.43□□□□□ -1.7
USP39-206ENST00000448971 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
USP39-206ENST00000448971 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
USP39-206ENST00000448971 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
USP39-206ENST00000448971 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
USP39-206ENST00000448971 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
USP39-206ENST00000448971 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
USP39-206ENST00000448971 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
USP39-206ENST00000448971 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
USP39-206ENST00000448971 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
USP39-206ENST00000448971 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
USP39-206ENST00000448971 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
USP39-206ENST00000448971 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
USP39-206ENST00000448971 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
USP39-206ENST00000448971 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
USP39-206ENST00000448971 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
USP39-206ENST00000448971 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
USP39-206ENST00000448971 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
USP39-206ENST00000448971 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
USP39-206ENST00000448971 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
USP39-206ENST00000448971 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
USP39-206ENST00000448971 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
USP39-206ENST00000448971 PRM1P04553 51 aa2.56□□□□□ -2
USP39-206ENST00000448971 INE1O15225 51 aa2.38□□□□□ -2.03
USP39-206ENST00000448971 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
USP39-206ENST00000448971 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 58.1 ms