RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
CHCHD3-203ENST00000448878 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
CHCHD3-203ENST00000448878 Q1T7F1 81 aa6.46□□□□□ -1.38
CHCHD3-203ENST00000448878 A0A1B0GU69 56 aa6.45□□□□□ -1.38
CHCHD3-203ENST00000448878 MT1MQ8N339 61 aa6.44□□□□□ -1.38
CHCHD3-203ENST00000448878 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
CHCHD3-203ENST00000448878 KRTAP5-4Q6L8H1 288 aa6.37□□□□□ -1.39
CHCHD3-203ENST00000448878 KRTAP4-3Q9BYR4 195 aa6.35□□□□□ -1.39
CHCHD3-203ENST00000448878 PSPHP1O15172 72 aa6.34□□□□□ -1.39
CHCHD3-203ENST00000448878 MT1LQ93083 61 aa6.34□□□□□ -1.39
CHCHD3-203ENST00000448878 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
CHCHD3-203ENST00000448878 H3BS24 57 aa6.3□□□□□ -1.4
CHCHD3-203ENST00000448878 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
CHCHD3-203ENST00000448878 A0A1B0GU33 70 aa6.28□□□□□ -1.4
CHCHD3-203ENST00000448878 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
CHCHD3-203ENST00000448878 UQCR11O14957 56 aa6.23□□□□□ -1.41
CHCHD3-203ENST00000448878 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
CHCHD3-203ENST00000448878 A6NED7 52 aa6.2□□□□□ -1.42
CHCHD3-203ENST00000448878 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
CHCHD3-203ENST00000448878 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
CHCHD3-203ENST00000448878 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
CHCHD3-203ENST00000448878 KRTAP4-2Q9BYR5 136 aa6.14□□□□□ -1.43
CHCHD3-203ENST00000448878 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
CHCHD3-203ENST00000448878 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
CHCHD3-203ENST00000448878 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
CHCHD3-203ENST00000448878 CDC42SE1Q9NRR8 79 aa6.05□□□□□ -1.44
CHCHD3-203ENST00000448878 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
CHCHD3-203ENST00000448878 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CHCHD3-203ENST00000448878 A8MU10 97 aa6.01□□□□□ -1.45
CHCHD3-203ENST00000448878 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
CHCHD3-203ENST00000448878 TNP1P09430 55 aa6□□□□□ -1.45
CHCHD3-203ENST00000448878 K7ERS5 55 aa5.98□□□□□ -1.45
CHCHD3-203ENST00000448878 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
CHCHD3-203ENST00000448878 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-203ENST00000448878 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
CHCHD3-203ENST00000448878 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
CHCHD3-203ENST00000448878 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
CHCHD3-203ENST00000448878 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
CHCHD3-203ENST00000448878 ROMO1P60602 79 aa5.62□□□□□ -1.51
CHCHD3-203ENST00000448878 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
CHCHD3-203ENST00000448878 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
CHCHD3-203ENST00000448878 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
CHCHD3-203ENST00000448878 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
CHCHD3-203ENST00000448878 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
CHCHD3-203ENST00000448878 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
CHCHD3-203ENST00000448878 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
CHCHD3-203ENST00000448878 MT1AP04731 61 aa5.38□□□□□ -1.55
CHCHD3-203ENST00000448878 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
CHCHD3-203ENST00000448878 MUC5BQ9HC84 5762 aaPredicted RBP5.37□□□□□ -1.55
CHCHD3-203ENST00000448878 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
CHCHD3-203ENST00000448878 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CHCHD3-203ENST00000448878 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
CHCHD3-203ENST00000448878 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
CHCHD3-203ENST00000448878 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
CHCHD3-203ENST00000448878 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
CHCHD3-203ENST00000448878 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
CHCHD3-203ENST00000448878 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
CHCHD3-203ENST00000448878 MT3P25713 68 aa4.98□□□□□ -1.61
CHCHD3-203ENST00000448878 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
CHCHD3-203ENST00000448878 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
CHCHD3-203ENST00000448878 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
CHCHD3-203ENST00000448878 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
CHCHD3-203ENST00000448878 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
CHCHD3-203ENST00000448878 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
CHCHD3-203ENST00000448878 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
CHCHD3-203ENST00000448878 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
CHCHD3-203ENST00000448878 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
CHCHD3-203ENST00000448878 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
CHCHD3-203ENST00000448878 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
CHCHD3-203ENST00000448878 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
CHCHD3-203ENST00000448878 INE1O15225 51 aa3.5□□□□□ -1.85
CHCHD3-203ENST00000448878 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
CHCHD3-203ENST00000448878 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
CHCHD3-203ENST00000448878 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
CHCHD3-203ENST00000448878 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
CHCHD3-203ENST00000448878 PRM1P04553 51 aa2.9□□□□□ -1.95
CHCHD3-203ENST00000448878 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 109.2 ms