RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 NSD1Q96L73 2696 aaPredicted RBP0.46□□□□□ -2.34
LINC01564-201ENST00000448327 NOTCH1P46531 2555 aa0.46□□□□□ -2.34
LINC01564-201ENST00000448327 FLNCQ14315 2725 aa0.45□□□□□ -2.34
LINC01564-201ENST00000448327 SPTAN1Q13813 2472 aaKnown RBP0.45□□□□□ -2.34
LINC01564-201ENST00000448327 C9orf92A6NGG3 77 aa0.45□□□□□ -2.34
LINC01564-201ENST00000448327 SMR3BP02814 79 aaPredicted RBP0.45□□□□□ -2.34
LINC01564-201ENST00000448327 PRM1P04553 51 aa0.44□□□□□ -2.34
LINC01564-201ENST00000448327 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
LINC01564-201ENST00000448327 DNHD1Q96M86 4753 aa0.44□□□□□ -2.34
LINC01564-201ENST00000448327 M0R2T5 61 aa0.43□□□□□ -2.34
LINC01564-201ENST00000448327 KRTAP19-2Q3LHN2 52 aa0.43□□□□□ -2.34
LINC01564-201ENST00000448327 FLNAP21333 2647 aaKnown RBP0.43□□□□□ -2.34
LINC01564-201ENST00000448327 MYO18BQ8IUG5 2567 aa0.43□□□□□ -2.34
LINC01564-201ENST00000448327 MGAM2Q2M2H8 2515 aa0.42□□□□□ -2.34
LINC01564-201ENST00000448327 RYR3Q15413 4870 aa0.42□□□□□ -2.34
LINC01564-201ENST00000448327 ACANP16112 2415 aa0.42□□□□□ -2.34
LINC01564-201ENST00000448327 MYO9AB2RTY4 2548 aa0.42□□□□□ -2.34
LINC01564-201ENST00000448327 CEP295Q9C0D2 2601 aa0.42□□□□□ -2.34
LINC01564-201ENST00000448327 HYDINQ4G0P3 5121 aa0.41□□□□□ -2.34
LINC01564-201ENST00000448327 HERC2O95714 4834 aa0.41□□□□□ -2.34
LINC01564-201ENST00000448327 MUC2Q02817 5179 aa0.41□□□□□ -2.34
LINC01564-201ENST00000448327 BIRC6Q9NR09 4857 aa0.41□□□□□ -2.34
LINC01564-201ENST00000448327 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
LINC01564-201ENST00000448327 ACACBO00763 2458 aa0.4□□□□□ -2.35
LINC01564-201ENST00000448327 FASNP49327 2511 aaKnown RBP0.39□□□□□ -2.35
LINC01564-201ENST00000448327 MT1XP80297 61 aa0.39□□□□□ -2.35
LINC01564-201ENST00000448327 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
LINC01564-201ENST00000448327 KRTAP6-2Q3LI66 62 aa0.38□□□□□ -2.35
LINC01564-201ENST00000448327 SPRR2GQ9BYE4 73 aa0.38□□□□□ -2.35
LINC01564-201ENST00000448327 MAST4O15021 2626 aa0.37□□□□□ -2.35
LINC01564-201ENST00000448327 FLNBO75369 2602 aaKnown RBP0.37□□□□□ -2.35
LINC01564-201ENST00000448327 KMT2CQ8NEZ4 4911 aaKnown RBP0.37□□□□□ -2.35
LINC01564-201ENST00000448327 MT1AP04731 61 aa0.37□□□□□ -2.35
LINC01564-201ENST00000448327 RYR1P21817 5038 aa0.36□□□□□ -2.35
LINC01564-201ENST00000448327 KRTAP19-8Q3LI54 63 aa0.36□□□□□ -2.35
LINC01564-201ENST00000448327 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
LINC01564-201ENST00000448327 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
LINC01564-201ENST00000448327 UBR4Q5T4S7 5183 aa0.35□□□□□ -2.35
LINC01564-201ENST00000448327 PCLOQ9Y6V0 5065 aa0.35□□□□□ -2.35
LINC01564-201ENST00000448327 RYR2Q92736 4967 aa0.35□□□□□ -2.35
LINC01564-201ENST00000448327 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
LINC01564-201ENST00000448327 MT1BP07438 61 aa0.35□□□□□ -2.35
LINC01564-201ENST00000448327 KRTAP19-7Q3SYF9 63 aa0.35□□□□□ -2.35
LINC01564-201ENST00000448327 EPPK1P58107 5090 aaKnown RBP0.34□□□□□ -2.35
LINC01564-201ENST00000448327 SPRR2DP22532 72 aa0.34□□□□□ -2.36
LINC01564-201ENST00000448327 SPRR2BP35325 72 aa0.34□□□□□ -2.36
LINC01564-201ENST00000448327 MT1LQ93083 61 aa0.34□□□□□ -2.36
LINC01564-201ENST00000448327 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
LINC01564-201ENST00000448327 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
LINC01564-201ENST00000448327 USH2AO75445 5202 aa0.34□□□□□ -2.36
LINC01564-201ENST00000448327 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
LINC01564-201ENST00000448327 MT1EP04732 61 aa0.33□□□□□ -2.36
LINC01564-201ENST00000448327 SPRR2EP22531 72 aa0.33□□□□□ -2.36
LINC01564-201ENST00000448327 SPRR2AP35326 72 aa0.33□□□□□ -2.36
LINC01564-201ENST00000448327 ABCA13Q86UQ4 5058 aa0.32□□□□□ -2.36
LINC01564-201ENST00000448327 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
LINC01564-201ENST00000448327 SSPOA2VEC9 5147 aa0.32□□□□□ -2.36
LINC01564-201ENST00000448327 KMT2DO14686 5537 aa0.3□□□□□ -2.36
LINC01564-201ENST00000448327 MT1FP04733 61 aa0.3□□□□□ -2.36
LINC01564-201ENST00000448327 MT1HL1P0DM35 61 aa0.3□□□□□ -2.36
LINC01564-201ENST00000448327 KIAA1109Q2LD37 5005 aa0.29□□□□□ -2.36
LINC01564-201ENST00000448327 MT2AP02795 61 aa0.29□□□□□ -2.36
LINC01564-201ENST00000448327 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
LINC01564-201ENST00000448327 MT1GP13640 62 aa0.28□□□□□ -2.36
LINC01564-201ENST00000448327 MT1MQ8N339 61 aa0.28□□□□□ -2.36
LINC01564-201ENST00000448327 MT1HP80294 61 aa0.27□□□□□ -2.37
LINC01564-201ENST00000448327 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
LINC01564-201ENST00000448327 FSIP2Q5CZC0 6907 aa0.2□□□□□ -2.38
LINC01564-201ENST00000448327 MUC12Q9UKN1 5478 aa0.19□□□□□ -2.38
LINC01564-201ENST00000448327 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
LINC01564-201ENST00000448327 SYNE2Q8WXH0 6885 aaKnown RBP0.17□□□□□ -2.38
LINC01564-201ENST00000448327 KRTAP19-6Q3LI70 58 aa0.13□□□□□ -2.39
LINC01564-201ENST00000448327 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
LINC01564-201ENST00000448327 NEBP20929 6669 aa0.05□□□□□ -2.4
LINC01564-201ENST00000448327 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
LINC01564-201ENST00000448327 MT4P47944 62 aa0.02□□□□□ -2.41
LINC01564-201ENST00000448327 KRTAP20-1Q3LI63 56 aa0.02□□□□□ -2.41
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms