RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 KRTAP19-3Q7Z4W3 81 aa8.75□□□□□ -1.01
C9orf3-207ENST00000445181 LCE5AQ5TCM9 118 aa8.74□□□□□ -1.01
C9orf3-207ENST00000445181 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
C9orf3-207ENST00000445181 MT1GP13640 62 aa8.57□□□□□ -1.04
C9orf3-207ENST00000445181 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
C9orf3-207ENST00000445181 DSTQ03001 7570 aaKnown RBP8.54□□□□□ -1.04
C9orf3-207ENST00000445181 MT1LQ93083 61 aa8.53□□□□□ -1.04
C9orf3-207ENST00000445181 KRTAP12-3P60328 96 aa8.48□□□□□ -1.05
C9orf3-207ENST00000445181 CDC42SE1Q9NRR8 79 aa8.44□□□□□ -1.06
C9orf3-207ENST00000445181 MT1MQ8N339 61 aa8.43□□□□□ -1.06
C9orf3-207ENST00000445181 KRTAP4-9Q9BYQ8 210 aa8.42□□□□□ -1.06
C9orf3-207ENST00000445181 ROMO1P60602 79 aa8.3□□□□□ -1.08
C9orf3-207ENST00000445181 KRTAP23-1A1A580 65 aa8.28□□□□□ -1.08
C9orf3-207ENST00000445181 KRTAP4-3Q9BYR4 195 aa8.22□□□□□ -1.09
C9orf3-207ENST00000445181 GPR98Q8WXG9 6306 aa8.2□□□□□ -1.1
C9orf3-207ENST00000445181 LCE1DQ5T752 114 aa8.2□□□□□ -1.1
C9orf3-207ENST00000445181 LCE4AQ5TA78 99 aa8.17□□□□□ -1.1
C9orf3-207ENST00000445181 KRTAP4-7Q9BYR0 210 aa8.14□□□□□ -1.11
C9orf3-207ENST00000445181 MT4P47944 62 aa8.11□□□□□ -1.11
C9orf3-207ENST00000445181 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
C9orf3-207ENST00000445181 KRTAP5-4Q6L8H1 288 aa8□□□□□ -1.13
C9orf3-207ENST00000445181 KRTAP19-4Q3LI73 84 aa7.98□□□□□ -1.13
C9orf3-207ENST00000445181 HMCN1Q96RW7 5635 aa7.97□□□□□ -1.13
C9orf3-207ENST00000445181 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
C9orf3-207ENST00000445181 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
C9orf3-207ENST00000445181 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
C9orf3-207ENST00000445181 AHNAK2Q8IVF2 5795 aa7.74□□□□□ -1.17
C9orf3-207ENST00000445181 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
C9orf3-207ENST00000445181 KRTAP5-5Q701N2 237 aaPredicted RBP7.67□□□□□ -1.18
C9orf3-207ENST00000445181 KRTAP5-10Q6L8G5 202 aa7.65□□□□□ -1.18
C9orf3-207ENST00000445181 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
C9orf3-207ENST00000445181 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
C9orf3-207ENST00000445181 KRTAP12-4P60329 112 aa7.5□□□□□ -1.21
C9orf3-207ENST00000445181 KRTAP5-3Q6L8H2 238 aa7.47□□□□□ -1.21
C9orf3-207ENST00000445181 PMAIP1Q13794 54 aa7.44□□□□□ -1.22
C9orf3-207ENST00000445181 KRTAP5-7Q6L8G8 165 aa7.36□□□□□ -1.23
C9orf3-207ENST00000445181 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
C9orf3-207ENST00000445181 SYNE1Q8NF91 8797 aaKnown RBP7.31□□□□□ -1.24
C9orf3-207ENST00000445181 MT1AP04731 61 aa7.27□□□□□ -1.25
C9orf3-207ENST00000445181 KRTAP6-1Q3LI64 71 aa7.21□□□□□ -1.26
C9orf3-207ENST00000445181 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
C9orf3-207ENST00000445181 PRAC1Q96KF2 57 aa7.09□□□□□ -1.27
C9orf3-207ENST00000445181 KRTAP5-2Q701N4 177 aa6.99□□□□□ -1.29
C9orf3-207ENST00000445181 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
C9orf3-207ENST00000445181 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
C9orf3-207ENST00000445181 KRTAP6-2Q3LI66 62 aa6.84□□□□□ -1.31
C9orf3-207ENST00000445181 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
C9orf3-207ENST00000445181 KRTAP5-8O75690 187 aa6.69□□□□□ -1.34
C9orf3-207ENST00000445181 MT3P25713 68 aa6.66□□□□□ -1.34
C9orf3-207ENST00000445181 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
C9orf3-207ENST00000445181 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
C9orf3-207ENST00000445181 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
C9orf3-207ENST00000445181 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
C9orf3-207ENST00000445181 MUC5ACP98088 5654 aa6.37□□□□□ -1.39
C9orf3-207ENST00000445181 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
C9orf3-207ENST00000445181 KRTAP5-1Q6L8H4 278 aa6.29□□□□□ -1.4
C9orf3-207ENST00000445181 LCE1EQ5T753 118 aa6□□□□□ -1.45
C9orf3-207ENST00000445181 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
C9orf3-207ENST00000445181 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
C9orf3-207ENST00000445181 LCE1BQ5T7P3 118 aa5.69□□□□□ -1.5
C9orf3-207ENST00000445181 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
C9orf3-207ENST00000445181 LCE1CQ5T751 118 aa5.57□□□□□ -1.52
C9orf3-207ENST00000445181 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
C9orf3-207ENST00000445181 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
C9orf3-207ENST00000445181 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
C9orf3-207ENST00000445181 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
C9orf3-207ENST00000445181 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
C9orf3-207ENST00000445181 LCE1FQ5T754 118 aa4.92□□□□□ -1.62
C9orf3-207ENST00000445181 KRTAP21-2Q3LI59 83 aa4.72□□□□□ -1.65
C9orf3-207ENST00000445181 H3BS24 57 aa4.64□□□□□ -1.67
C9orf3-207ENST00000445181 PHGR1C9JFL3 82 aa4.47□□□□□ -1.69
C9orf3-207ENST00000445181 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
C9orf3-207ENST00000445181 PRM1P04553 51 aa4.27□□□□□ -1.73
C9orf3-207ENST00000445181 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
C9orf3-207ENST00000445181 INE1O15225 51 aa4.08□□□□□ -1.76
C9orf3-207ENST00000445181 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
C9orf3-207ENST00000445181 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
C9orf3-207ENST00000445181 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms