RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

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Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KRTAP5-4Q6L8H1 288 aa7.25□□□□□ -1.25
VSX1-206ENST00000444511 AHNAK2Q8IVF2 5795 aa7.2□□□□□ -1.26
VSX1-206ENST00000444511 PRR15LQ9BU68 103 aa7.19□□□□□ -1.26
VSX1-206ENST00000444511 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
VSX1-206ENST00000444511 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
VSX1-206ENST00000444511 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
VSX1-206ENST00000444511 KRTAP5-10Q6L8G5 202 aa7.06□□□□□ -1.28
VSX1-206ENST00000444511 ATP5EP56381 51 aaPredicted RBP7.05□□□□□ -1.28
VSX1-206ENST00000444511 CCDC179H3BU77 68 aa7.03□□□□□ -1.28
VSX1-206ENST00000444511 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
VSX1-206ENST00000444511 UQCR11O14957 56 aa6.94□□□□□ -1.3
VSX1-206ENST00000444511 KRTAP20-2Q3LI61 65 aa6.87□□□□□ -1.31
VSX1-206ENST00000444511 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
VSX1-206ENST00000444511 KRTAP5-5Q701N2 237 aaPredicted RBP6.87□□□□□ -1.31
VSX1-206ENST00000444511 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
VSX1-206ENST00000444511 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
VSX1-206ENST00000444511 KRTAP5-7Q6L8G8 165 aa6.82□□□□□ -1.32
VSX1-206ENST00000444511 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
VSX1-206ENST00000444511 TMEM258P61165 79 aa6.76□□□□□ -1.33
VSX1-206ENST00000444511 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
VSX1-206ENST00000444511 K7ERS5 55 aa6.71□□□□□ -1.34
VSX1-206ENST00000444511 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
VSX1-206ENST00000444511 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
VSX1-206ENST00000444511 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
VSX1-206ENST00000444511 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
VSX1-206ENST00000444511 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
VSX1-206ENST00000444511 PSPHP1O15172 72 aa6.5□□□□□ -1.37
VSX1-206ENST00000444511 V9GYY9 64 aa6.47□□□□□ -1.37
VSX1-206ENST00000444511 Q1T7F1 81 aa6.38□□□□□ -1.39
VSX1-206ENST00000444511 MT1AP04731 61 aa6.35□□□□□ -1.39
VSX1-206ENST00000444511 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
VSX1-206ENST00000444511 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
VSX1-206ENST00000444511 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
VSX1-206ENST00000444511 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
VSX1-206ENST00000444511 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
VSX1-206ENST00000444511 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
VSX1-206ENST00000444511 A6NED7 52 aa6.28□□□□□ -1.4
VSX1-206ENST00000444511 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
VSX1-206ENST00000444511 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
VSX1-206ENST00000444511 ROMO1P60602 79 aa6.18□□□□□ -1.42
VSX1-206ENST00000444511 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
VSX1-206ENST00000444511 PCP4P48539 62 aa6.12□□□□□ -1.43
VSX1-206ENST00000444511 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
VSX1-206ENST00000444511 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
VSX1-206ENST00000444511 AHNAKQ09666 5890 aaKnown RBP5.99□□□□□ -1.45
VSX1-206ENST00000444511 MUC5ACP98088 5654 aa5.98□□□□□ -1.45
VSX1-206ENST00000444511 OBSCNQ5VST9 7968 aa5.97□□□□□ -1.45
VSX1-206ENST00000444511 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
VSX1-206ENST00000444511 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
VSX1-206ENST00000444511 MT3P25713 68 aa5.84□□□□□ -1.47
VSX1-206ENST00000444511 KRTAP5-1Q6L8H4 278 aa5.7□□□□□ -1.5
VSX1-206ENST00000444511 LCE1EQ5T753 118 aa5.4□□□□□ -1.54
VSX1-206ENST00000444511 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
VSX1-206ENST00000444511 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
VSX1-206ENST00000444511 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
VSX1-206ENST00000444511 LCE1CQ5T751 118 aa5□□□□□ -1.61
VSX1-206ENST00000444511 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
VSX1-206ENST00000444511 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
VSX1-206ENST00000444511 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
VSX1-206ENST00000444511 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
VSX1-206ENST00000444511 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
VSX1-206ENST00000444511 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
VSX1-206ENST00000444511 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
VSX1-206ENST00000444511 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
VSX1-206ENST00000444511 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
VSX1-206ENST00000444511 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
VSX1-206ENST00000444511 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
VSX1-206ENST00000444511 H3BS24 57 aa4.14□□□□□ -1.75
VSX1-206ENST00000444511 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
VSX1-206ENST00000444511 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
VSX1-206ENST00000444511 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
VSX1-206ENST00000444511 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
VSX1-206ENST00000444511 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
VSX1-206ENST00000444511 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
VSX1-206ENST00000444511 PRM1P04553 51 aa3.14□□□□□ -1.91
VSX1-206ENST00000444511 INE1O15225 51 aa2.77□□□□□ -1.97
VSX1-206ENST00000444511 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 35 ms