RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 MT1GP13640 62 aa7.81□□□□□ -1.16
TRAF4-205ENST00000444415 MT1LQ93083 61 aa7.81□□□□□ -1.16
TRAF4-205ENST00000444415 MT1MQ8N339 61 aa7.74□□□□□ -1.17
TRAF4-205ENST00000444415 A6NED7 52 aa7.68□□□□□ -1.18
TRAF4-205ENST00000444415 K7ERS5 55 aa7.68□□□□□ -1.18
TRAF4-205ENST00000444415 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
TRAF4-205ENST00000444415 KRTAP4-3Q9BYR4 195 aa7.61□□□□□ -1.19
TRAF4-205ENST00000444415 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
TRAF4-205ENST00000444415 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
TRAF4-205ENST00000444415 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
TRAF4-205ENST00000444415 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
TRAF4-205ENST00000444415 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
TRAF4-205ENST00000444415 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
TRAF4-205ENST00000444415 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
TRAF4-205ENST00000444415 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
TRAF4-205ENST00000444415 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
TRAF4-205ENST00000444415 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
TRAF4-205ENST00000444415 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
TRAF4-205ENST00000444415 KRTAP5-4Q6L8H1 288 aa7.31□□□□□ -1.24
TRAF4-205ENST00000444415 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
TRAF4-205ENST00000444415 MT4P47944 62 aa7.25□□□□□ -1.25
TRAF4-205ENST00000444415 ROMO1P60602 79 aa7.23□□□□□ -1.25
TRAF4-205ENST00000444415 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.25
TRAF4-205ENST00000444415 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
TRAF4-205ENST00000444415 KRTAP5-5Q701N2 237 aaPredicted RBP7.13□□□□□ -1.27
TRAF4-205ENST00000444415 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
TRAF4-205ENST00000444415 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
TRAF4-205ENST00000444415 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
TRAF4-205ENST00000444415 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
TRAF4-205ENST00000444415 AHNAK2Q8IVF2 5795 aa7.04□□□□□ -1.28
TRAF4-205ENST00000444415 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
TRAF4-205ENST00000444415 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
TRAF4-205ENST00000444415 KRTAP20-2Q3LI61 65 aa6.86□□□□□ -1.31
TRAF4-205ENST00000444415 KTN1-AS1Q86SY8 53 aa6.83□□□□□ -1.32
TRAF4-205ENST00000444415 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
TRAF4-205ENST00000444415 KRTAP5-10Q6L8G5 202 aa6.77□□□□□ -1.33
TRAF4-205ENST00000444415 KRTAP12-4P60329 112 aa6.75□□□□□ -1.33
TRAF4-205ENST00000444415 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
TRAF4-205ENST00000444415 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
TRAF4-205ENST00000444415 MT1AP04731 61 aa6.62□□□□□ -1.35
TRAF4-205ENST00000444415 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
TRAF4-205ENST00000444415 KRTAP5-7Q6L8G8 165 aa6.45□□□□□ -1.38
TRAF4-205ENST00000444415 KRTAP5-2Q701N4 177 aa6.45□□□□□ -1.38
TRAF4-205ENST00000444415 PRAC1Q96KF2 57 aa6.45□□□□□ -1.38
TRAF4-205ENST00000444415 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
TRAF4-205ENST00000444415 KRTAP6-2Q3LI66 62 aa6.27□□□□□ -1.41
TRAF4-205ENST00000444415 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
TRAF4-205ENST00000444415 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
TRAF4-205ENST00000444415 KRTAP5-8O75690 187 aa6.04□□□□□ -1.44
TRAF4-205ENST00000444415 MT3P25713 68 aa6□□□□□ -1.45
TRAF4-205ENST00000444415 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.48
TRAF4-205ENST00000444415 KRTAP5-1Q6L8H4 278 aa5.76□□□□□ -1.49
TRAF4-205ENST00000444415 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
TRAF4-205ENST00000444415 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
TRAF4-205ENST00000444415 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
TRAF4-205ENST00000444415 LCE1EQ5T753 118 aa5.49□□□□□ -1.53
TRAF4-205ENST00000444415 LUZP6Q538Z0 58 aa5.4□□□□□ -1.54
TRAF4-205ENST00000444415 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
TRAF4-205ENST00000444415 H3BS24 57 aa5.26□□□□□ -1.57
TRAF4-205ENST00000444415 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
TRAF4-205ENST00000444415 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.58
TRAF4-205ENST00000444415 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
TRAF4-205ENST00000444415 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
TRAF4-205ENST00000444415 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
TRAF4-205ENST00000444415 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
TRAF4-205ENST00000444415 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-205ENST00000444415 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
TRAF4-205ENST00000444415 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
TRAF4-205ENST00000444415 INE1O15225 51 aa4.5□□□□□ -1.69
TRAF4-205ENST00000444415 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
TRAF4-205ENST00000444415 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
TRAF4-205ENST00000444415 PHGR1C9JFL3 82 aa4□□□□□ -1.77
TRAF4-205ENST00000444415 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
TRAF4-205ENST00000444415 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
TRAF4-205ENST00000444415 PRM1P04553 51 aa3.71□□□□□ -1.82
TRAF4-205ENST00000444415 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
TRAF4-205ENST00000444415 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms