RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
EDEM1-203ENST00000443790 MT1GP13640 62 aa7.21□□□□□ -1.26
EDEM1-203ENST00000443790 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
EDEM1-203ENST00000443790 HMCN1Q96RW7 5635 aa7.16□□□□□ -1.26
EDEM1-203ENST00000443790 TNP1P09430 55 aa7.16□□□□□ -1.26
EDEM1-203ENST00000443790 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
EDEM1-203ENST00000443790 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
EDEM1-203ENST00000443790 MT1MQ8N339 61 aa7.1□□□□□ -1.27
EDEM1-203ENST00000443790 MT4P47944 62 aa7.09□□□□□ -1.27
EDEM1-203ENST00000443790 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
EDEM1-203ENST00000443790 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
EDEM1-203ENST00000443790 KRTAP5-10Q6L8G5 202 aa7.04□□□□□ -1.28
EDEM1-203ENST00000443790 MT1LQ93083 61 aa7.04□□□□□ -1.28
EDEM1-203ENST00000443790 K7ERS5 55 aa7.03□□□□□ -1.28
EDEM1-203ENST00000443790 A6NED7 52 aa7.02□□□□□ -1.29
EDEM1-203ENST00000443790 KRTAP5-4Q6L8H1 288 aa6.95□□□□□ -1.3
EDEM1-203ENST00000443790 KRTAP4-3Q9BYR4 195 aa6.93□□□□□ -1.3
EDEM1-203ENST00000443790 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
EDEM1-203ENST00000443790 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
EDEM1-203ENST00000443790 KRTAP5-7Q6L8G8 165 aa6.84□□□□□ -1.31
EDEM1-203ENST00000443790 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
EDEM1-203ENST00000443790 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
EDEM1-203ENST00000443790 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
EDEM1-203ENST00000443790 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
EDEM1-203ENST00000443790 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
EDEM1-203ENST00000443790 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
EDEM1-203ENST00000443790 ROMO1P60602 79 aa6.62□□□□□ -1.35
EDEM1-203ENST00000443790 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
EDEM1-203ENST00000443790 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
EDEM1-203ENST00000443790 KRTAP20-2Q3LI61 65 aa6.58□□□□□ -1.36
EDEM1-203ENST00000443790 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
EDEM1-203ENST00000443790 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
EDEM1-203ENST00000443790 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
EDEM1-203ENST00000443790 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
EDEM1-203ENST00000443790 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
EDEM1-203ENST00000443790 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
EDEM1-203ENST00000443790 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
EDEM1-203ENST00000443790 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
EDEM1-203ENST00000443790 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
EDEM1-203ENST00000443790 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
EDEM1-203ENST00000443790 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
EDEM1-203ENST00000443790 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
EDEM1-203ENST00000443790 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
EDEM1-203ENST00000443790 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
EDEM1-203ENST00000443790 MT1AP04731 61 aa5.99□□□□□ -1.45
EDEM1-203ENST00000443790 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
EDEM1-203ENST00000443790 MUC5BQ9HC84 5762 aaPredicted RBP5.96□□□□□ -1.45
EDEM1-203ENST00000443790 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
EDEM1-203ENST00000443790 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
EDEM1-203ENST00000443790 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
EDEM1-203ENST00000443790 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
EDEM1-203ENST00000443790 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
EDEM1-203ENST00000443790 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
EDEM1-203ENST00000443790 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
EDEM1-203ENST00000443790 MT3P25713 68 aa5.48□□□□□ -1.53
EDEM1-203ENST00000443790 KRTAP5-1Q6L8H4 278 aa5.47□□□□□ -1.53
EDEM1-203ENST00000443790 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
EDEM1-203ENST00000443790 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
EDEM1-203ENST00000443790 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
EDEM1-203ENST00000443790 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
EDEM1-203ENST00000443790 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
EDEM1-203ENST00000443790 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
EDEM1-203ENST00000443790 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
EDEM1-203ENST00000443790 H3BS24 57 aa4.55□□□□□ -1.68
EDEM1-203ENST00000443790 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
EDEM1-203ENST00000443790 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
EDEM1-203ENST00000443790 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
EDEM1-203ENST00000443790 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
EDEM1-203ENST00000443790 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
EDEM1-203ENST00000443790 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
EDEM1-203ENST00000443790 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
EDEM1-203ENST00000443790 INE1O15225 51 aa4.11□□□□□ -1.75
EDEM1-203ENST00000443790 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
EDEM1-203ENST00000443790 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
EDEM1-203ENST00000443790 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
EDEM1-203ENST00000443790 PRM1P04553 51 aa3.43□□□□□ -1.86
EDEM1-203ENST00000443790 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
EDEM1-203ENST00000443790 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 121.5 ms