RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 PRO2289Q9P1D8 64 aa3.04□□□□□ -1.92
R3HDM1-210ENST00000443537 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
R3HDM1-210ENST00000443537 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
R3HDM1-210ENST00000443537 PMAIP1Q13794 54 aa3□□□□□ -1.93
R3HDM1-210ENST00000443537 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
R3HDM1-210ENST00000443537 MT1XP80297 61 aa2.93□□□□□ -1.94
R3HDM1-210ENST00000443537 ROMO1P60602 79 aa2.91□□□□□ -1.94
R3HDM1-210ENST00000443537 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
R3HDM1-210ENST00000443537 TNP1P09430 55 aa2.9□□□□□ -1.95
R3HDM1-210ENST00000443537 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
R3HDM1-210ENST00000443537 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
R3HDM1-210ENST00000443537 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
R3HDM1-210ENST00000443537 USH2AO75445 5202 aa2.87□□□□□ -1.95
R3HDM1-210ENST00000443537 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
R3HDM1-210ENST00000443537 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
R3HDM1-210ENST00000443537 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
R3HDM1-210ENST00000443537 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
R3HDM1-210ENST00000443537 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
R3HDM1-210ENST00000443537 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
R3HDM1-210ENST00000443537 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
R3HDM1-210ENST00000443537 KTN1-AS1Q86SY8 53 aa2.8□□□□□ -1.96
R3HDM1-210ENST00000443537 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
R3HDM1-210ENST00000443537 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
R3HDM1-210ENST00000443537 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
R3HDM1-210ENST00000443537 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
R3HDM1-210ENST00000443537 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
R3HDM1-210ENST00000443537 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
R3HDM1-210ENST00000443537 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
R3HDM1-210ENST00000443537 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
R3HDM1-210ENST00000443537 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
R3HDM1-210ENST00000443537 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
R3HDM1-210ENST00000443537 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
R3HDM1-210ENST00000443537 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
R3HDM1-210ENST00000443537 MT1EP04732 61 aa2.58□□□□□ -2
R3HDM1-210ENST00000443537 KMT2DO14686 5537 aa2.55□□□□□ -2
R3HDM1-210ENST00000443537 LCE1CQ5T751 118 aa2.55□□□□□ -2
R3HDM1-210ENST00000443537 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
R3HDM1-210ENST00000443537 MT1GP13640 62 aa2.53□□□□□ -2
R3HDM1-210ENST00000443537 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
R3HDM1-210ENST00000443537 MT1LQ93083 61 aa2.52□□□□□ -2.01
R3HDM1-210ENST00000443537 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
R3HDM1-210ENST00000443537 SPRR2EP22531 72 aa2.49□□□□□ -2.01
R3HDM1-210ENST00000443537 SPRR2BP35325 72 aa2.49□□□□□ -2.01
R3HDM1-210ENST00000443537 SPRR2AP35326 72 aa2.49□□□□□ -2.01
R3HDM1-210ENST00000443537 MT1MQ8N339 61 aa2.44□□□□□ -2.02
R3HDM1-210ENST00000443537 SPRR2DP22532 72 aa2.41□□□□□ -2.02
R3HDM1-210ENST00000443537 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.03
R3HDM1-210ENST00000443537 NEBP20929 6669 aa2.36□□□□□ -2.03
R3HDM1-210ENST00000443537 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
R3HDM1-210ENST00000443537 KRTAP2-3P0C7H8 128 aa2.32□□□□□ -2.04
R3HDM1-210ENST00000443537 KRTAP2-4Q9BYR9 128 aa2.32□□□□□ -2.04
R3HDM1-210ENST00000443537 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
R3HDM1-210ENST00000443537 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
R3HDM1-210ENST00000443537 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
R3HDM1-210ENST00000443537 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
R3HDM1-210ENST00000443537 MT1AP04731 61 aa2.17□□□□□ -2.06
R3HDM1-210ENST00000443537 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
R3HDM1-210ENST00000443537 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
R3HDM1-210ENST00000443537 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
R3HDM1-210ENST00000443537 MT4P47944 62 aa2.04□□□□□ -2.08
R3HDM1-210ENST00000443537 INE1O15225 51 aa2.02□□□□□ -2.09
R3HDM1-210ENST00000443537 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
R3HDM1-210ENST00000443537 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
R3HDM1-210ENST00000443537 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
R3HDM1-210ENST00000443537 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
R3HDM1-210ENST00000443537 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
R3HDM1-210ENST00000443537 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
R3HDM1-210ENST00000443537 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
R3HDM1-210ENST00000443537 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
R3HDM1-210ENST00000443537 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
R3HDM1-210ENST00000443537 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
R3HDM1-210ENST00000443537 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
R3HDM1-210ENST00000443537 PRM1P04553 51 aa1.47□□□□□ -2.17
R3HDM1-210ENST00000443537 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
R3HDM1-210ENST00000443537 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
R3HDM1-210ENST00000443537 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
R3HDM1-210ENST00000443537 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
R3HDM1-210ENST00000443537 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms