RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 A6NED7 52 aa2.86□□□□□ -1.95
SSXP3-201ENST00000442971 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
SSXP3-201ENST00000442971 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
SSXP3-201ENST00000442971 C8orf87E5RJ46 101 aa2.84□□□□□ -1.96
SSXP3-201ENST00000442971 ACYP2P14621 99 aa2.82□□□□□ -1.96
SSXP3-201ENST00000442971 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
SSXP3-201ENST00000442971 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
SSXP3-201ENST00000442971 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
SSXP3-201ENST00000442971 LCA10Q71F78 164 aa2.8□□□□□ -1.96
SSXP3-201ENST00000442971 SPTSSBQ8NFR3 76 aa2.8□□□□□ -1.96
SSXP3-201ENST00000442971 DMAC1Q96GE9 116 aa2.78□□□□□ -1.96
SSXP3-201ENST00000442971 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
SSXP3-201ENST00000442971 SPINK7P58062 85 aa2.75□□□□□ -1.97
SSXP3-201ENST00000442971 LINC00313P59037 77 aa2.75□□□□□ -1.97
SSXP3-201ENST00000442971 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
SSXP3-201ENST00000442971 A0A1B0GU69 56 aa2.74□□□□□ -1.97
SSXP3-201ENST00000442971 A8MU10 97 aa2.74□□□□□ -1.97
SSXP3-201ENST00000442971 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
SSXP3-201ENST00000442971 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
SSXP3-201ENST00000442971 Q5W150 140 aa2.73□□□□□ -1.97
SSXP3-201ENST00000442971 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SSXP3-201ENST00000442971 UQCR11O14957 56 aa2.72□□□□□ -1.97
SSXP3-201ENST00000442971 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
SSXP3-201ENST00000442971 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
SSXP3-201ENST00000442971 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
SSXP3-201ENST00000442971 CAMK2N1Q7Z7J9 78 aa2.71□□□□□ -1.98
SSXP3-201ENST00000442971 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
SSXP3-201ENST00000442971 H0YAA0 97 aa2.66□□□□□ -1.98
SSXP3-201ENST00000442971 MT1GP13640 62 aa2.64□□□□□ -1.99
SSXP3-201ENST00000442971 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
SSXP3-201ENST00000442971 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
SSXP3-201ENST00000442971 MT1EP04732 61 aa2.63□□□□□ -1.99
SSXP3-201ENST00000442971 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
SSXP3-201ENST00000442971 CRIPTQ9P021 101 aa2.62□□□□□ -1.99
SSXP3-201ENST00000442971 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
SSXP3-201ENST00000442971 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
SSXP3-201ENST00000442971 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
SSXP3-201ENST00000442971 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
SSXP3-201ENST00000442971 K7ERS5 55 aa2.59□□□□□ -2
SSXP3-201ENST00000442971 MT1MQ8N339 61 aa2.58□□□□□ -2
SSXP3-201ENST00000442971 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
SSXP3-201ENST00000442971 A0A1B0GU33 70 aa2.56□□□□□ -2
SSXP3-201ENST00000442971 CSAG1Q6PB30 78 aa2.56□□□□□ -2
SSXP3-201ENST00000442971 ADM2Q7Z4H4 148 aa2.56□□□□□ -2
SSXP3-201ENST00000442971 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
SSXP3-201ENST00000442971 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
SSXP3-201ENST00000442971 ROMO1P60602 79 aa2.47□□□□□ -2.01
SSXP3-201ENST00000442971 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
SSXP3-201ENST00000442971 S4R3F8 94 aa2.43□□□□□ -2.02
SSXP3-201ENST00000442971 M0QZ58 72 aa2.39□□□□□ -2.03
SSXP3-201ENST00000442971 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
SSXP3-201ENST00000442971 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
SSXP3-201ENST00000442971 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
SSXP3-201ENST00000442971 A0A0D9SG42 100 aa2.35□□□□□ -2.03
SSXP3-201ENST00000442971 MT1LQ93083 61 aa2.35□□□□□ -2.03
SSXP3-201ENST00000442971 P0C880 135 aa2.32□□□□□ -2.04
SSXP3-201ENST00000442971 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
SSXP3-201ENST00000442971 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
SSXP3-201ENST00000442971 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
SSXP3-201ENST00000442971 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
SSXP3-201ENST00000442971 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
SSXP3-201ENST00000442971 R4GN34 69 aa2.25□□□□□ -2.05
SSXP3-201ENST00000442971 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
SSXP3-201ENST00000442971 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
SSXP3-201ENST00000442971 TNP1P09430 55 aa2.11□□□□□ -2.07
SSXP3-201ENST00000442971 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
SSXP3-201ENST00000442971 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
SSXP3-201ENST00000442971 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
SSXP3-201ENST00000442971 MT1AP04731 61 aa1.98□□□□□ -2.09
SSXP3-201ENST00000442971 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
SSXP3-201ENST00000442971 INE1O15225 51 aa1.94□□□□□ -2.1
SSXP3-201ENST00000442971 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
SSXP3-201ENST00000442971 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SSXP3-201ENST00000442971 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SSXP3-201ENST00000442971 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SSXP3-201ENST00000442971 PRM1P04553 51 aa1.28□□□□□ -2.2
SSXP3-201ENST00000442971 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 73.8 ms