RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 HTN3P15516 51 aa0.61□□□□□ -2.31
LSM1P1-201ENST00000438629 SPRR2DP22532 72 aa0.61□□□□□ -2.31
LSM1P1-201ENST00000438629 HYDINQ4G0P3 5121 aa0.61□□□□□ -2.31
LSM1P1-201ENST00000438629 MAP1AP78559 2803 aaPredicted RBP0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 HIVEP1P15822 2718 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 LRBAP50851 2863 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 NBEAL2Q6ZNJ1 2754 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 SPRR2BP35325 72 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 SVEP1Q4LDE5 3571 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 RYR1P21817 5038 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 ZANQ9Y493 2812 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 HERC2O95714 4834 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 MGAM2Q2M2H8 2515 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 MT1AP04731 61 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 KRTAP6-2Q3LI66 62 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 LRP1BQ9NZR2 4599 aa0.59□□□□□ -2.32
LSM1P1-201ENST00000438629 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.32
LSM1P1-201ENST00000438629 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 PCLOQ9Y6V0 5065 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 CENPEQ02224 2701 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 CD52P31358 61 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 FLNAP21333 2647 aaKnown RBP0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 ABCA13Q86UQ4 5058 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 TGP01266 2768 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 MUC17Q685J3 4493 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 VPS13CQ709C8 3753 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 NBEAL1Q6ZS30 2694 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 SPRR2AP35326 72 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 KIAA1109Q2LD37 5005 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 STARD9Q9P2P6 4700 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 MXRA5Q9NR99 2828 aa0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 DEFB4AO15263 64 aa0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 HERC1Q15751 4861 aa0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
LSM1P1-201ENST00000438629 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.32
LSM1P1-201ENST00000438629 SPRR2EP22531 72 aa0.51□□□□□ -2.33
LSM1P1-201ENST00000438629 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
LSM1P1-201ENST00000438629 HMCN2Q8NDA2 5059 aa0.49□□□□□ -2.33
LSM1P1-201ENST00000438629 LRP2P98164 4655 aa0.48□□□□□ -2.33
LSM1P1-201ENST00000438629 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
LSM1P1-201ENST00000438629 MT1EP04732 61 aa0.45□□□□□ -2.34
LSM1P1-201ENST00000438629 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
LSM1P1-201ENST00000438629 MUC2Q02817 5179 aa0.44□□□□□ -2.34
LSM1P1-201ENST00000438629 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
LSM1P1-201ENST00000438629 MT1LQ93083 61 aa0.42□□□□□ -2.34
LSM1P1-201ENST00000438629 USH2AO75445 5202 aa0.42□□□□□ -2.34
LSM1P1-201ENST00000438629 MT1HP80294 61 aa0.41□□□□□ -2.34
LSM1P1-201ENST00000438629 SPRR2GQ9BYE4 73 aa0.41□□□□□ -2.34
LSM1P1-201ENST00000438629 SSPOA2VEC9 5147 aa0.4□□□□□ -2.34
LSM1P1-201ENST00000438629 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
LSM1P1-201ENST00000438629 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
LSM1P1-201ENST00000438629 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
LSM1P1-201ENST00000438629 MT1XP80297 61 aa0.37□□□□□ -2.35
LSM1P1-201ENST00000438629 MT1HL1P0DM35 61 aa0.35□□□□□ -2.35
LSM1P1-201ENST00000438629 KRTAP19-8Q3LI54 63 aa0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 KMT2DO14686 5537 aa0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 SYNE2Q8WXH0 6885 aaKnown RBP0.33□□□□□ -2.36
LSM1P1-201ENST00000438629 MT1GP13640 62 aa0.33□□□□□ -2.36
LSM1P1-201ENST00000438629 NEBP20929 6669 aa0.33□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP19-2Q3LHN2 52 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP20-1Q3LI63 56 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP19-7Q3SYF9 63 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
LSM1P1-201ENST00000438629 MT1FP04733 61 aa0.28□□□□□ -2.36
LSM1P1-201ENST00000438629 MT2AP02795 61 aa0.27□□□□□ -2.37
LSM1P1-201ENST00000438629 MT1BP07438 61 aa0.27□□□□□ -2.37
LSM1P1-201ENST00000438629 KRTAP19-6Q3LI70 58 aa0.27□□□□□ -2.37
LSM1P1-201ENST00000438629 MT1MQ8N339 61 aa0.25□□□□□ -2.37
LSM1P1-201ENST00000438629 MT4P47944 62 aa0.23□□□□□ -2.37
LSM1P1-201ENST00000438629 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
LSM1P1-201ENST00000438629 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 107.8 ms