RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SPART-AS1P0CW21 52 aa1.09□□□□□ -2.23
HMGB1P12-201ENST00000438594 DEFB104AQ8WTQ1 72 aa1.09□□□□□ -2.23
HMGB1P12-201ENST00000438594 FRAS1Q86XX4 4008 aa1.09□□□□□ -2.24
HMGB1P12-201ENST00000438594 DNAH11Q96DT5 4516 aa1.08□□□□□ -2.24
HMGB1P12-201ENST00000438594 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
HMGB1P12-201ENST00000438594 HTN1P15515 57 aa1.07□□□□□ -2.24
HMGB1P12-201ENST00000438594 PKD1P98161 4303 aa1.07□□□□□ -2.24
HMGB1P12-201ENST00000438594 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
HMGB1P12-201ENST00000438594 LRP1BQ9NZR2 4599 aa1.06□□□□□ -2.24
HMGB1P12-201ENST00000438594 CLPSL2Q6UWE3 100 aa1.06□□□□□ -2.24
HMGB1P12-201ENST00000438594 SACSQ9NZJ4 4579 aa1.05□□□□□ -2.24
HMGB1P12-201ENST00000438594 PKHD1P08F94 4074 aa1.05□□□□□ -2.24
HMGB1P12-201ENST00000438594 APOBP04114 4563 aaKnown RBP1.04□□□□□ -2.24
HMGB1P12-201ENST00000438594 A0A096LNI7 61 aa1.04□□□□□ -2.24
HMGB1P12-201ENST00000438594 DEFB4AO15263 64 aa1.04□□□□□ -2.24
HMGB1P12-201ENST00000438594 TOMM7Q9P0U1 55 aa1.04□□□□□ -2.24
HMGB1P12-201ENST00000438594 SPINK1P00995 79 aa1.03□□□□□ -2.24
HMGB1P12-201ENST00000438594 VPS13BQ7Z7G8 4022 aa1.02□□□□□ -2.25
HMGB1P12-201ENST00000438594 SRRM2Q9UQ35 2752 aaKnown RBP1.01□□□□□ -2.25
HMGB1P12-201ENST00000438594 TNXBP22105 4242 aa1□□□□□ -2.25
HMGB1P12-201ENST00000438594 DYNC1H1Q14204 4646 aaKnown RBP1□□□□□ -2.25
HMGB1P12-201ENST00000438594 RPS29P62273 56 aaKnown RBP1□□□□□ -2.25
HMGB1P12-201ENST00000438594 FAT1Q14517 4588 aa0.99□□□□□ -2.25
HMGB1P12-201ENST00000438594 HTN3P15516 51 aa0.99□□□□□ -2.25
HMGB1P12-201ENST00000438594 HSPG2P98160 4391 aa0.99□□□□□ -2.25
HMGB1P12-201ENST00000438594 FAT3Q8TDW7 4589 aa0.98□□□□□ -2.25
HMGB1P12-201ENST00000438594 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
HMGB1P12-201ENST00000438594 LRP1Q07954 4544 aaKnown RBP0.96□□□□□ -2.26
HMGB1P12-201ENST00000438594 MYCBP2O75592 4640 aa0.95□□□□□ -2.26
HMGB1P12-201ENST00000438594 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
HMGB1P12-201ENST00000438594 SPINK6Q6UWN8 80 aa0.94□□□□□ -2.26
HMGB1P12-201ENST00000438594 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
HMGB1P12-201ENST00000438594 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
HMGB1P12-201ENST00000438594 M0R2T5 61 aa0.93□□□□□ -2.26
HMGB1P12-201ENST00000438594 LPAP08519 4548 aa0.93□□□□□ -2.26
HMGB1P12-201ENST00000438594 USH2AO75445 5202 aa0.92□□□□□ -2.26
HMGB1P12-201ENST00000438594 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
HMGB1P12-201ENST00000438594 KRTAP19-2Q3LHN2 52 aa0.92□□□□□ -2.26
HMGB1P12-201ENST00000438594 M0QZ58 72 aa0.91□□□□□ -2.26
HMGB1P12-201ENST00000438594 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.26
HMGB1P12-201ENST00000438594 MUC17Q685J3 4493 aa0.9□□□□□ -2.26
HMGB1P12-201ENST00000438594 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
HMGB1P12-201ENST00000438594 LRP2P98164 4655 aa0.88□□□□□ -2.27
HMGB1P12-201ENST00000438594 PRM1P04553 51 aa0.87□□□□□ -2.27
HMGB1P12-201ENST00000438594 FLGP20930 4061 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P12-201ENST00000438594 C9orf92A6NGG3 77 aa0.81□□□□□ -2.28
HMGB1P12-201ENST00000438594 SMR3BP02814 79 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P12-201ENST00000438594 TNP1P09430 55 aa0.81□□□□□ -2.28
HMGB1P12-201ENST00000438594 SPRR2GQ9BYE4 73 aa0.79□□□□□ -2.28
HMGB1P12-201ENST00000438594 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
HMGB1P12-201ENST00000438594 MT1HP80294 61 aa0.75□□□□□ -2.29
HMGB1P12-201ENST00000438594 MT1BP07438 61 aa0.74□□□□□ -2.29
HMGB1P12-201ENST00000438594 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
HMGB1P12-201ENST00000438594 MT2AP02795 61 aa0.73□□□□□ -2.29
HMGB1P12-201ENST00000438594 MT1FP04733 61 aa0.73□□□□□ -2.29
HMGB1P12-201ENST00000438594 MT1XP80297 61 aa0.72□□□□□ -2.29
HMGB1P12-201ENST00000438594 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
HMGB1P12-201ENST00000438594 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
HMGB1P12-201ENST00000438594 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
HMGB1P12-201ENST00000438594 SPRR2DP22532 72 aa0.68□□□□□ -2.3
HMGB1P12-201ENST00000438594 KRTAP19-7Q3SYF9 63 aa0.66□□□□□ -2.3
HMGB1P12-201ENST00000438594 KRTAP19-6Q3LI70 58 aa0.65□□□□□ -2.31
HMGB1P12-201ENST00000438594 SPRR2BP35325 72 aa0.64□□□□□ -2.31
HMGB1P12-201ENST00000438594 MT1EP04732 61 aa0.63□□□□□ -2.31
HMGB1P12-201ENST00000438594 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
HMGB1P12-201ENST00000438594 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
HMGB1P12-201ENST00000438594 MT1LQ93083 61 aa0.62□□□□□ -2.31
HMGB1P12-201ENST00000438594 MT1AP04731 61 aa0.6□□□□□ -2.31
HMGB1P12-201ENST00000438594 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
HMGB1P12-201ENST00000438594 SPRR2AP35326 72 aa0.57□□□□□ -2.32
HMGB1P12-201ENST00000438594 MT1MQ8N339 61 aa0.57□□□□□ -2.32
HMGB1P12-201ENST00000438594 MT1GP13640 62 aa0.55□□□□□ -2.32
HMGB1P12-201ENST00000438594 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
HMGB1P12-201ENST00000438594 SPRR2EP22531 72 aa0.5□□□□□ -2.33
HMGB1P12-201ENST00000438594 KRTAP6-1Q3LI64 71 aa0.5□□□□□ -2.33
HMGB1P12-201ENST00000438594 KRTAP20-2Q3LI61 65 aa0.44□□□□□ -2.34
HMGB1P12-201ENST00000438594 MT4P47944 62 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 207 ms