RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ROMO1P60602 79 aa6.11□□□□□ -1.43
SNRPB-202ENST00000438552 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
SNRPB-202ENST00000438552 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
SNRPB-202ENST00000438552 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
SNRPB-202ENST00000438552 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
SNRPB-202ENST00000438552 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
SNRPB-202ENST00000438552 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
SNRPB-202ENST00000438552 MT1EP04732 61 aa5.99□□□□□ -1.45
SNRPB-202ENST00000438552 SPRR2DP22532 72 aa5.95□□□□□ -1.46
SNRPB-202ENST00000438552 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
SNRPB-202ENST00000438552 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
SNRPB-202ENST00000438552 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
SNRPB-202ENST00000438552 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
SNRPB-202ENST00000438552 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
SNRPB-202ENST00000438552 MT1LQ93083 61 aa5.78□□□□□ -1.48
SNRPB-202ENST00000438552 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
SNRPB-202ENST00000438552 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
SNRPB-202ENST00000438552 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
SNRPB-202ENST00000438552 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
SNRPB-202ENST00000438552 MT1GP13640 62 aa5.73□□□□□ -1.49
SNRPB-202ENST00000438552 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
SNRPB-202ENST00000438552 MT1MQ8N339 61 aa5.68□□□□□ -1.5
SNRPB-202ENST00000438552 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
SNRPB-202ENST00000438552 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
SNRPB-202ENST00000438552 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
SNRPB-202ENST00000438552 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
SNRPB-202ENST00000438552 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
SNRPB-202ENST00000438552 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
SNRPB-202ENST00000438552 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
SNRPB-202ENST00000438552 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
SNRPB-202ENST00000438552 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
SNRPB-202ENST00000438552 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.54
SNRPB-202ENST00000438552 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
SNRPB-202ENST00000438552 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
SNRPB-202ENST00000438552 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
SNRPB-202ENST00000438552 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
SNRPB-202ENST00000438552 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
SNRPB-202ENST00000438552 MT4P47944 62 aa5.22□□□□□ -1.57
SNRPB-202ENST00000438552 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
SNRPB-202ENST00000438552 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
SNRPB-202ENST00000438552 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
SNRPB-202ENST00000438552 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
SNRPB-202ENST00000438552 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
SNRPB-202ENST00000438552 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
SNRPB-202ENST00000438552 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
SNRPB-202ENST00000438552 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
SNRPB-202ENST00000438552 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
SNRPB-202ENST00000438552 MT1AP04731 61 aa4.91□□□□□ -1.62
SNRPB-202ENST00000438552 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
SNRPB-202ENST00000438552 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SNRPB-202ENST00000438552 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
SNRPB-202ENST00000438552 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
SNRPB-202ENST00000438552 MUC5ACP98088 5654 aa4.65□□□□□ -1.66
SNRPB-202ENST00000438552 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
SNRPB-202ENST00000438552 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
SNRPB-202ENST00000438552 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
SNRPB-202ENST00000438552 MT3P25713 68 aa4.46□□□□□ -1.7
SNRPB-202ENST00000438552 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
SNRPB-202ENST00000438552 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
SNRPB-202ENST00000438552 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
SNRPB-202ENST00000438552 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
SNRPB-202ENST00000438552 LCE1EQ5T753 118 aa4□□□□□ -1.77
SNRPB-202ENST00000438552 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
SNRPB-202ENST00000438552 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
SNRPB-202ENST00000438552 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
SNRPB-202ENST00000438552 INE1O15225 51 aa3.72□□□□□ -1.81
SNRPB-202ENST00000438552 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
SNRPB-202ENST00000438552 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
SNRPB-202ENST00000438552 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
SNRPB-202ENST00000438552 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
SNRPB-202ENST00000438552 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SNRPB-202ENST00000438552 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
SNRPB-202ENST00000438552 PRM1P04553 51 aa3.15□□□□□ -1.91
SNRPB-202ENST00000438552 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SNRPB-202ENST00000438552 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SNRPB-202ENST00000438552 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SNRPB-202ENST00000438552 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 14 ms