RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
SCRN1-208ENST00000438497 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
SCRN1-208ENST00000438497 S4R3F8 94 aa3.7□□□□□ -1.82
SCRN1-208ENST00000438497 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
SCRN1-208ENST00000438497 A0A0D9SG42 100 aa3.65□□□□□ -1.83
SCRN1-208ENST00000438497 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
SCRN1-208ENST00000438497 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
SCRN1-208ENST00000438497 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
SCRN1-208ENST00000438497 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
SCRN1-208ENST00000438497 MT1XP80297 61 aa3.59□□□□□ -1.83
SCRN1-208ENST00000438497 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
SCRN1-208ENST00000438497 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
SCRN1-208ENST00000438497 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
SCRN1-208ENST00000438497 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
SCRN1-208ENST00000438497 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
SCRN1-208ENST00000438497 M0QZ58 72 aa3.55□□□□□ -1.84
SCRN1-208ENST00000438497 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
SCRN1-208ENST00000438497 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
SCRN1-208ENST00000438497 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
SCRN1-208ENST00000438497 INE1O15225 51 aa3.46□□□□□ -1.86
SCRN1-208ENST00000438497 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
SCRN1-208ENST00000438497 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
SCRN1-208ENST00000438497 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
SCRN1-208ENST00000438497 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
SCRN1-208ENST00000438497 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
SCRN1-208ENST00000438497 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
SCRN1-208ENST00000438497 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
SCRN1-208ENST00000438497 MT4P47944 62 aa3.36□□□□□ -1.87
SCRN1-208ENST00000438497 R4GN34 69 aa3.35□□□□□ -1.87
SCRN1-208ENST00000438497 MT3P25713 68 aa3.31□□□□□ -1.88
SCRN1-208ENST00000438497 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
SCRN1-208ENST00000438497 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
SCRN1-208ENST00000438497 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
SCRN1-208ENST00000438497 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
SCRN1-208ENST00000438497 MT1EP04732 61 aa3.2□□□□□ -1.9
SCRN1-208ENST00000438497 MT1GP13640 62 aa3.18□□□□□ -1.9
SCRN1-208ENST00000438497 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
SCRN1-208ENST00000438497 TNP1P09430 55 aa3.15□□□□□ -1.91
SCRN1-208ENST00000438497 MT1MQ8N339 61 aa3.09□□□□□ -1.91
SCRN1-208ENST00000438497 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SCRN1-208ENST00000438497 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
SCRN1-208ENST00000438497 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
SCRN1-208ENST00000438497 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
SCRN1-208ENST00000438497 MT1LQ93083 61 aa3□□□□□ -1.93
SCRN1-208ENST00000438497 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
SCRN1-208ENST00000438497 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
SCRN1-208ENST00000438497 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
SCRN1-208ENST00000438497 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
SCRN1-208ENST00000438497 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SCRN1-208ENST00000438497 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SCRN1-208ENST00000438497 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
SCRN1-208ENST00000438497 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
SCRN1-208ENST00000438497 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
SCRN1-208ENST00000438497 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
SCRN1-208ENST00000438497 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
SCRN1-208ENST00000438497 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
SCRN1-208ENST00000438497 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
SCRN1-208ENST00000438497 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
SCRN1-208ENST00000438497 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
SCRN1-208ENST00000438497 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
SCRN1-208ENST00000438497 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
SCRN1-208ENST00000438497 MT1AP04731 61 aa2.55□□□□□ -2
SCRN1-208ENST00000438497 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
SCRN1-208ENST00000438497 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SCRN1-208ENST00000438497 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
SCRN1-208ENST00000438497 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
SCRN1-208ENST00000438497 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SCRN1-208ENST00000438497 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
SCRN1-208ENST00000438497 PRM1P04553 51 aa2.13□□□□□ -2.07
SCRN1-208ENST00000438497 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
SCRN1-208ENST00000438497 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SCRN1-208ENST00000438497 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
SCRN1-208ENST00000438497 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
SCRN1-208ENST00000438497 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
SCRN1-208ENST00000438497 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
SCRN1-208ENST00000438497 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
SCRN1-208ENST00000438497 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SCRN1-208ENST00000438497 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 108.7 ms