RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
MUC1-211ENST00000438413 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.38
MUC1-211ENST00000438413 A8MU10 97 aa6.38□□□□□ -1.39
MUC1-211ENST00000438413 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
MUC1-211ENST00000438413 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
MUC1-211ENST00000438413 A0A1B0GU69 56 aa6.3□□□□□ -1.4
MUC1-211ENST00000438413 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
MUC1-211ENST00000438413 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
MUC1-211ENST00000438413 H7BZZ5 65 aa6.18□□□□□ -1.42
MUC1-211ENST00000438413 COX7CP15954 63 aa6.16□□□□□ -1.42
MUC1-211ENST00000438413 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
MUC1-211ENST00000438413 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
MUC1-211ENST00000438413 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
MUC1-211ENST00000438413 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
MUC1-211ENST00000438413 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
MUC1-211ENST00000438413 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
MUC1-211ENST00000438413 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
MUC1-211ENST00000438413 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
MUC1-211ENST00000438413 UQCR11O14957 56 aa5.78□□□□□ -1.48
MUC1-211ENST00000438413 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
MUC1-211ENST00000438413 KRTAP5-8O75690 187 aa5.75□□□□□ -1.49
MUC1-211ENST00000438413 MT1AP04731 61 aa5.75□□□□□ -1.49
MUC1-211ENST00000438413 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
MUC1-211ENST00000438413 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
MUC1-211ENST00000438413 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
MUC1-211ENST00000438413 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
MUC1-211ENST00000438413 ATP5EP56381 51 aaPredicted RBP5.69□□□□□ -1.5
MUC1-211ENST00000438413 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
MUC1-211ENST00000438413 H3BS24 57 aa5.66□□□□□ -1.5
MUC1-211ENST00000438413 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
MUC1-211ENST00000438413 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
MUC1-211ENST00000438413 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
MUC1-211ENST00000438413 AHNAKQ09666 5890 aaKnown RBP5.59□□□□□ -1.51
MUC1-211ENST00000438413 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
MUC1-211ENST00000438413 K7ERS5 55 aa5.58□□□□□ -1.52
MUC1-211ENST00000438413 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
MUC1-211ENST00000438413 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
MUC1-211ENST00000438413 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
MUC1-211ENST00000438413 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
MUC1-211ENST00000438413 TMEM258P61165 79 aa5.44□□□□□ -1.54
MUC1-211ENST00000438413 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
MUC1-211ENST00000438413 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
MUC1-211ENST00000438413 MT3P25713 68 aa5.28□□□□□ -1.56
MUC1-211ENST00000438413 PSPHP1O15172 72 aa5.26□□□□□ -1.57
MUC1-211ENST00000438413 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
MUC1-211ENST00000438413 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
MUC1-211ENST00000438413 PCP4P48539 62 aa5.21□□□□□ -1.58
MUC1-211ENST00000438413 Q1T7F1 81 aa5.21□□□□□ -1.58
MUC1-211ENST00000438413 V9GYY9 64 aa5.18□□□□□ -1.58
MUC1-211ENST00000438413 ROMO1P60602 79 aa5.12□□□□□ -1.59
MUC1-211ENST00000438413 A6NED7 52 aa5.06□□□□□ -1.6
MUC1-211ENST00000438413 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
MUC1-211ENST00000438413 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
MUC1-211ENST00000438413 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
MUC1-211ENST00000438413 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
MUC1-211ENST00000438413 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
MUC1-211ENST00000438413 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
MUC1-211ENST00000438413 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
MUC1-211ENST00000438413 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
MUC1-211ENST00000438413 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
MUC1-211ENST00000438413 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
MUC1-211ENST00000438413 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
MUC1-211ENST00000438413 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
MUC1-211ENST00000438413 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
MUC1-211ENST00000438413 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
MUC1-211ENST00000438413 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
MUC1-211ENST00000438413 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
MUC1-211ENST00000438413 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
MUC1-211ENST00000438413 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
MUC1-211ENST00000438413 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
MUC1-211ENST00000438413 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
MUC1-211ENST00000438413 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
MUC1-211ENST00000438413 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
MUC1-211ENST00000438413 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
MUC1-211ENST00000438413 PRM1P04553 51 aa2.6□□□□□ -1.99
MUC1-211ENST00000438413 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
MUC1-211ENST00000438413 INE1O15225 51 aa2.41□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 128.9 ms