RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 KRTAP2-1Q9BYU5 128 aa8.6□□□□□ -1.03
RBFOX2-209ENST00000438146 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
RBFOX2-209ENST00000438146 MT1LQ93083 61 aa8.51□□□□□ -1.05
RBFOX2-209ENST00000438146 MT1GP13640 62 aa8.49□□□□□ -1.05
RBFOX2-209ENST00000438146 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
RBFOX2-209ENST00000438146 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
RBFOX2-209ENST00000438146 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
RBFOX2-209ENST00000438146 MT1MQ8N339 61 aa8.4□□□□□ -1.06
RBFOX2-209ENST00000438146 ROMO1P60602 79 aa8.32□□□□□ -1.08
RBFOX2-209ENST00000438146 DSTQ03001 7570 aaKnown RBP8.32□□□□□ -1.08
RBFOX2-209ENST00000438146 KRTAP4-3Q9BYR4 195 aa8.26□□□□□ -1.09
RBFOX2-209ENST00000438146 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
RBFOX2-209ENST00000438146 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
RBFOX2-209ENST00000438146 KRTAP15-1Q3LI76 137 aa8□□□□□ -1.13
RBFOX2-209ENST00000438146 BRK1Q8WUW1 75 aa8□□□□□ -1.13
RBFOX2-209ENST00000438146 KRTAP4-9Q9BYQ8 210 aa7.97□□□□□ -1.13
RBFOX2-209ENST00000438146 KRTAP19-4Q3LI73 84 aa7.84□□□□□ -1.15
RBFOX2-209ENST00000438146 LCE4AQ5TA78 99 aa7.84□□□□□ -1.16
RBFOX2-209ENST00000438146 LCE3CQ5T5A8 94 aa7.82□□□□□ -1.16
RBFOX2-209ENST00000438146 MT4P47944 62 aa7.79□□□□□ -1.16
RBFOX2-209ENST00000438146 LCE1DQ5T752 114 aa7.79□□□□□ -1.16
RBFOX2-209ENST00000438146 KRTAP5-4Q6L8H1 288 aa7.75□□□□□ -1.17
RBFOX2-209ENST00000438146 LOC100996750A0A140TA64 210 aa7.73□□□□□ -1.17
RBFOX2-209ENST00000438146 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
RBFOX2-209ENST00000438146 HMCN1Q96RW7 5635 aa7.62□□□□□ -1.19
RBFOX2-209ENST00000438146 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
RBFOX2-209ENST00000438146 PMAIP1Q13794 54 aa7.51□□□□□ -1.21
RBFOX2-209ENST00000438146 KRTAP9-6A8MVA2 160 aa7.39□□□□□ -1.23
RBFOX2-209ENST00000438146 GPR98Q8WXG9 6306 aa7.37□□□□□ -1.23
RBFOX2-209ENST00000438146 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
RBFOX2-209ENST00000438146 KRTAP20-2Q3LI61 65 aa7.33□□□□□ -1.24
RBFOX2-209ENST00000438146 SYNE1Q8NF91 8797 aaKnown RBP7.29□□□□□ -1.24
RBFOX2-209ENST00000438146 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
RBFOX2-209ENST00000438146 MT1AP04731 61 aa7.23□□□□□ -1.25
RBFOX2-209ENST00000438146 PRAC1Q96KF2 57 aa7.22□□□□□ -1.25
RBFOX2-209ENST00000438146 KRTAP6-1Q3LI64 71 aa7.2□□□□□ -1.26
RBFOX2-209ENST00000438146 PRO0628Q9UI54 55 aa7.2□□□□□ -1.26
RBFOX2-209ENST00000438146 AHNAK2Q8IVF2 5795 aa7.19□□□□□ -1.26
RBFOX2-209ENST00000438146 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
RBFOX2-209ENST00000438146 KRTAP5-10Q6L8G5 202 aa7.02□□□□□ -1.29
RBFOX2-209ENST00000438146 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.29
RBFOX2-209ENST00000438146 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
RBFOX2-209ENST00000438146 KRTAP5-2Q701N4 177 aa6.85□□□□□ -1.31
RBFOX2-209ENST00000438146 KRTAP6-2Q3LI66 62 aa6.82□□□□□ -1.32
RBFOX2-209ENST00000438146 KTN1-AS1Q86SY8 53 aa6.82□□□□□ -1.32
RBFOX2-209ENST00000438146 KRTAP5-7Q6L8G8 165 aa6.68□□□□□ -1.34
RBFOX2-209ENST00000438146 MT3P25713 68 aa6.59□□□□□ -1.35
RBFOX2-209ENST00000438146 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
RBFOX2-209ENST00000438146 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
RBFOX2-209ENST00000438146 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.4
RBFOX2-209ENST00000438146 H3BS24 57 aa6.28□□□□□ -1.4
RBFOX2-209ENST00000438146 KRTAP5-1Q6L8H4 278 aa6.1□□□□□ -1.43
RBFOX2-209ENST00000438146 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
RBFOX2-209ENST00000438146 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
RBFOX2-209ENST00000438146 LCE1EQ5T753 118 aa5.93□□□□□ -1.46
RBFOX2-209ENST00000438146 MUC5ACP98088 5654 aa5.9□□□□□ -1.46
RBFOX2-209ENST00000438146 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
RBFOX2-209ENST00000438146 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
RBFOX2-209ENST00000438146 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
RBFOX2-209ENST00000438146 LCE1BQ5T7P3 118 aa5.67□□□□□ -1.5
RBFOX2-209ENST00000438146 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
RBFOX2-209ENST00000438146 LCE1CQ5T751 118 aa5.52□□□□□ -1.53
RBFOX2-209ENST00000438146 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
RBFOX2-209ENST00000438146 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
RBFOX2-209ENST00000438146 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
RBFOX2-209ENST00000438146 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
RBFOX2-209ENST00000438146 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
RBFOX2-209ENST00000438146 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
RBFOX2-209ENST00000438146 KRTAP21-2Q3LI59 83 aa4.72□□□□□ -1.65
RBFOX2-209ENST00000438146 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
RBFOX2-209ENST00000438146 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
RBFOX2-209ENST00000438146 PRM1P04553 51 aa4.3□□□□□ -1.72
RBFOX2-209ENST00000438146 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
RBFOX2-209ENST00000438146 INE1O15225 51 aa4.1□□□□□ -1.75
RBFOX2-209ENST00000438146 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
RBFOX2-209ENST00000438146 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
RBFOX2-209ENST00000438146 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms