RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SEC61GP60059 68 aa4.84□□□□□ -1.63
HDAC8-213ENST00000436675 A0A1B0GU33 70 aa4.82□□□□□ -1.64
HDAC8-213ENST00000436675 TNP1P09430 55 aa4.81□□□□□ -1.64
HDAC8-213ENST00000436675 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
HDAC8-213ENST00000436675 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
HDAC8-213ENST00000436675 SMIM20Q8N5G0 67 aa4.79□□□□□ -1.64
HDAC8-213ENST00000436675 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
HDAC8-213ENST00000436675 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
HDAC8-213ENST00000436675 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
HDAC8-213ENST00000436675 COA5Q86WW8 74 aa4.76□□□□□ -1.65
HDAC8-213ENST00000436675 J3QR89 54 aa4.75□□□□□ -1.65
HDAC8-213ENST00000436675 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
HDAC8-213ENST00000436675 A8MU10 97 aa4.71□□□□□ -1.66
HDAC8-213ENST00000436675 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
HDAC8-213ENST00000436675 A0A1B0GV90 55 aa4.69□□□□□ -1.66
HDAC8-213ENST00000436675 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
HDAC8-213ENST00000436675 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
HDAC8-213ENST00000436675 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
HDAC8-213ENST00000436675 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
HDAC8-213ENST00000436675 A0A1B0GU69 56 aa4.52□□□□□ -1.69
HDAC8-213ENST00000436675 SERP2Q8N6R1 65 aa4.52□□□□□ -1.69
HDAC8-213ENST00000436675 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
HDAC8-213ENST00000436675 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
HDAC8-213ENST00000436675 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
HDAC8-213ENST00000436675 MT1AP04731 61 aa4.42□□□□□ -1.7
HDAC8-213ENST00000436675 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
HDAC8-213ENST00000436675 K7ERU9 68 aa4.34□□□□□ -1.71
HDAC8-213ENST00000436675 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
HDAC8-213ENST00000436675 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
HDAC8-213ENST00000436675 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
HDAC8-213ENST00000436675 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
HDAC8-213ENST00000436675 H7BZZ5 65 aa4.29□□□□□ -1.72
HDAC8-213ENST00000436675 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
HDAC8-213ENST00000436675 COX7CP15954 63 aa4.23□□□□□ -1.73
HDAC8-213ENST00000436675 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
HDAC8-213ENST00000436675 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
HDAC8-213ENST00000436675 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
HDAC8-213ENST00000436675 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
HDAC8-213ENST00000436675 UQCR11O14957 56 aa4.06□□□□□ -1.76
HDAC8-213ENST00000436675 MT3P25713 68 aa4.06□□□□□ -1.76
HDAC8-213ENST00000436675 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
HDAC8-213ENST00000436675 V9GYY9 64 aa4.04□□□□□ -1.76
HDAC8-213ENST00000436675 K7ERS5 55 aa3.95□□□□□ -1.78
HDAC8-213ENST00000436675 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
HDAC8-213ENST00000436675 ANAPC13Q9BS18 74 aa3.83□□□□□ -1.8
HDAC8-213ENST00000436675 ATP5EP56381 51 aaPredicted RBP3.82□□□□□ -1.8
HDAC8-213ENST00000436675 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
HDAC8-213ENST00000436675 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
HDAC8-213ENST00000436675 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
HDAC8-213ENST00000436675 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
HDAC8-213ENST00000436675 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
HDAC8-213ENST00000436675 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
HDAC8-213ENST00000436675 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
HDAC8-213ENST00000436675 PSPHP1O15172 72 aa3.65□□□□□ -1.83
HDAC8-213ENST00000436675 Q1T7F1 81 aa3.64□□□□□ -1.83
HDAC8-213ENST00000436675 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
HDAC8-213ENST00000436675 ROMO1P60602 79 aa3.6□□□□□ -1.83
HDAC8-213ENST00000436675 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
HDAC8-213ENST00000436675 TMEM258P61165 79 aa3.55□□□□□ -1.84
HDAC8-213ENST00000436675 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
HDAC8-213ENST00000436675 A6NED7 52 aa3.47□□□□□ -1.85
HDAC8-213ENST00000436675 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
HDAC8-213ENST00000436675 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
HDAC8-213ENST00000436675 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
HDAC8-213ENST00000436675 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
HDAC8-213ENST00000436675 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
HDAC8-213ENST00000436675 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
HDAC8-213ENST00000436675 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
HDAC8-213ENST00000436675 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
HDAC8-213ENST00000436675 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
HDAC8-213ENST00000436675 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
HDAC8-213ENST00000436675 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
HDAC8-213ENST00000436675 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
HDAC8-213ENST00000436675 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
HDAC8-213ENST00000436675 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
HDAC8-213ENST00000436675 INE1O15225 51 aa2.34□□□□□ -2.03
HDAC8-213ENST00000436675 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
HDAC8-213ENST00000436675 PRM1P04553 51 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 92.3 ms