RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
HMGN1-207ENST00000436324 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
HMGN1-207ENST00000436324 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
HMGN1-207ENST00000436324 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
HMGN1-207ENST00000436324 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
HMGN1-207ENST00000436324 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
HMGN1-207ENST00000436324 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
HMGN1-207ENST00000436324 TNP1P09430 55 aa6.61□□□□□ -1.35
HMGN1-207ENST00000436324 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
HMGN1-207ENST00000436324 MT1GP13640 62 aa6.58□□□□□ -1.36
HMGN1-207ENST00000436324 TMEM258P61165 79 aa6.58□□□□□ -1.36
HMGN1-207ENST00000436324 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
HMGN1-207ENST00000436324 MT1LQ93083 61 aa6.52□□□□□ -1.37
HMGN1-207ENST00000436324 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
HMGN1-207ENST00000436324 UQCR11O14957 56 aa6.49□□□□□ -1.37
HMGN1-207ENST00000436324 MT1MQ8N339 61 aa6.49□□□□□ -1.37
HMGN1-207ENST00000436324 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
HMGN1-207ENST00000436324 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
HMGN1-207ENST00000436324 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
HMGN1-207ENST00000436324 PSPHP1O15172 72 aa6.27□□□□□ -1.41
HMGN1-207ENST00000436324 MT4P47944 62 aa6.27□□□□□ -1.41
HMGN1-207ENST00000436324 K7ERS5 55 aa6.24□□□□□ -1.41
HMGN1-207ENST00000436324 V9GYY9 64 aa6.23□□□□□ -1.41
HMGN1-207ENST00000436324 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
HMGN1-207ENST00000436324 Q1T7F1 81 aa6.18□□□□□ -1.42
HMGN1-207ENST00000436324 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
HMGN1-207ENST00000436324 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
HMGN1-207ENST00000436324 A6NED7 52 aa6.05□□□□□ -1.44
HMGN1-207ENST00000436324 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
HMGN1-207ENST00000436324 AHNAK2Q8IVF2 5795 aa5.97□□□□□ -1.45
HMGN1-207ENST00000436324 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-207ENST00000436324 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
HMGN1-207ENST00000436324 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
HMGN1-207ENST00000436324 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
HMGN1-207ENST00000436324 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
HMGN1-207ENST00000436324 ROMO1P60602 79 aa5.81□□□□□ -1.48
HMGN1-207ENST00000436324 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
HMGN1-207ENST00000436324 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
HMGN1-207ENST00000436324 PCP4P48539 62 aa5.78□□□□□ -1.48
HMGN1-207ENST00000436324 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
HMGN1-207ENST00000436324 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
HMGN1-207ENST00000436324 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
HMGN1-207ENST00000436324 MT1AP04731 61 aa5.54□□□□□ -1.52
HMGN1-207ENST00000436324 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
HMGN1-207ENST00000436324 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
HMGN1-207ENST00000436324 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
HMGN1-207ENST00000436324 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
HMGN1-207ENST00000436324 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
HMGN1-207ENST00000436324 KRTAP5-11Q6L8G4 156 aa5.16□□□□□ -1.58
HMGN1-207ENST00000436324 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
HMGN1-207ENST00000436324 MT3P25713 68 aa5.07□□□□□ -1.6
HMGN1-207ENST00000436324 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.06□□□□□ -1.6
HMGN1-207ENST00000436324 AHNAKQ09666 5890 aaKnown RBP5.04□□□□□ -1.6
HMGN1-207ENST00000436324 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
HMGN1-207ENST00000436324 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
HMGN1-207ENST00000436324 MUC5BQ9HC84 5762 aaPredicted RBP4.97□□□□□ -1.61
HMGN1-207ENST00000436324 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
HMGN1-207ENST00000436324 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
HMGN1-207ENST00000436324 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
HMGN1-207ENST00000436324 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
HMGN1-207ENST00000436324 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
HMGN1-207ENST00000436324 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
HMGN1-207ENST00000436324 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
HMGN1-207ENST00000436324 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
HMGN1-207ENST00000436324 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
HMGN1-207ENST00000436324 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
HMGN1-207ENST00000436324 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
HMGN1-207ENST00000436324 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
HMGN1-207ENST00000436324 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
HMGN1-207ENST00000436324 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
HMGN1-207ENST00000436324 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
HMGN1-207ENST00000436324 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
HMGN1-207ENST00000436324 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
HMGN1-207ENST00000436324 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
HMGN1-207ENST00000436324 PRM1P04553 51 aa3□□□□□ -1.93
HMGN1-207ENST00000436324 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
HMGN1-207ENST00000436324 INE1O15225 51 aa2.44□□□□□ -2.02
HMGN1-207ENST00000436324 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 149.1 ms