RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ACYP2P14621 99 aa3.87□□□□□ -1.79
LINC01090-202ENST00000434418 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
LINC01090-202ENST00000434418 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
LINC01090-202ENST00000434418 K7ERU9 68 aa3.84□□□□□ -1.79
LINC01090-202ENST00000434418 CHKB-CPT1BH3BT56 60 aa3.83□□□□□ -1.8
LINC01090-202ENST00000434418 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
LINC01090-202ENST00000434418 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
LINC01090-202ENST00000434418 SPANXA2-OT1Q8N9U9 137 aa3.75□□□□□ -1.81
LINC01090-202ENST00000434418 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
LINC01090-202ENST00000434418 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
LINC01090-202ENST00000434418 SERP2Q8N6R1 65 aa3.71□□□□□ -1.82
LINC01090-202ENST00000434418 MT1EP04732 61 aa3.68□□□□□ -1.82
LINC01090-202ENST00000434418 A0A0D9SG42 100 aa3.67□□□□□ -1.82
LINC01090-202ENST00000434418 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
LINC01090-202ENST00000434418 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
LINC01090-202ENST00000434418 COA5Q86WW8 74 aa3.64□□□□□ -1.83
LINC01090-202ENST00000434418 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
LINC01090-202ENST00000434418 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
LINC01090-202ENST00000434418 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
LINC01090-202ENST00000434418 COX7CP15954 63 aa3.59□□□□□ -1.83
LINC01090-202ENST00000434418 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
LINC01090-202ENST00000434418 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
LINC01090-202ENST00000434418 A0A1B0GU33 70 aa3.56□□□□□ -1.84
LINC01090-202ENST00000434418 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
LINC01090-202ENST00000434418 H7BZZ5 65 aa3.55□□□□□ -1.84
LINC01090-202ENST00000434418 V9GYY9 64 aa3.55□□□□□ -1.84
LINC01090-202ENST00000434418 MT1GP13640 62 aa3.54□□□□□ -1.84
LINC01090-202ENST00000434418 MT1MQ8N339 61 aa3.52□□□□□ -1.85
LINC01090-202ENST00000434418 MT4P47944 62 aa3.51□□□□□ -1.85
LINC01090-202ENST00000434418 MT1LQ93083 61 aa3.5□□□□□ -1.85
LINC01090-202ENST00000434418 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
LINC01090-202ENST00000434418 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
LINC01090-202ENST00000434418 A0A1B0GU69 56 aa3.45□□□□□ -1.86
LINC01090-202ENST00000434418 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
LINC01090-202ENST00000434418 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
LINC01090-202ENST00000434418 ANAPC13Q9BS18 74 aa3.42□□□□□ -1.86
LINC01090-202ENST00000434418 TNP1P09430 55 aa3.4□□□□□ -1.87
LINC01090-202ENST00000434418 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
LINC01090-202ENST00000434418 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
LINC01090-202ENST00000434418 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
LINC01090-202ENST00000434418 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
LINC01090-202ENST00000434418 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
LINC01090-202ENST00000434418 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
LINC01090-202ENST00000434418 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
LINC01090-202ENST00000434418 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
LINC01090-202ENST00000434418 TMEM258P61165 79 aa3.25□□□□□ -1.89
LINC01090-202ENST00000434418 PSPHP1O15172 72 aa3.24□□□□□ -1.89
LINC01090-202ENST00000434418 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
LINC01090-202ENST00000434418 UQCR11O14957 56 aa3.21□□□□□ -1.9
LINC01090-202ENST00000434418 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
LINC01090-202ENST00000434418 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
LINC01090-202ENST00000434418 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
LINC01090-202ENST00000434418 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
LINC01090-202ENST00000434418 Q1T7F1 81 aa3.09□□□□□ -1.91
LINC01090-202ENST00000434418 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
LINC01090-202ENST00000434418 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
LINC01090-202ENST00000434418 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
LINC01090-202ENST00000434418 K7ERS5 55 aa3.05□□□□□ -1.92
LINC01090-202ENST00000434418 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
LINC01090-202ENST00000434418 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
LINC01090-202ENST00000434418 MT1AP04731 61 aa2.97□□□□□ -1.93
LINC01090-202ENST00000434418 RPS28P62857 69 aaKnown RBP2.94□□□□□ -1.94
LINC01090-202ENST00000434418 A6NED7 52 aa2.93□□□□□ -1.94
LINC01090-202ENST00000434418 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
LINC01090-202ENST00000434418 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
LINC01090-202ENST00000434418 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
LINC01090-202ENST00000434418 ROMO1P60602 79 aa2.86□□□□□ -1.95
LINC01090-202ENST00000434418 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
LINC01090-202ENST00000434418 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
LINC01090-202ENST00000434418 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
LINC01090-202ENST00000434418 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
LINC01090-202ENST00000434418 BRK1Q8WUW1 75 aa2.47□□□□□ -2.01
LINC01090-202ENST00000434418 INE1O15225 51 aa2.03□□□□□ -2.08
LINC01090-202ENST00000434418 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
LINC01090-202ENST00000434418 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
LINC01090-202ENST00000434418 PRM1P04553 51 aa1.46□□□□□ -2.18
LINC01090-202ENST00000434418 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms