RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
LMBR1-208ENST00000434278 UQCR11O14957 56 aa7.05□□□□□ -1.28
LMBR1-208ENST00000434278 KRTAP4-3Q9BYR4 195 aa7.04□□□□□ -1.28
LMBR1-208ENST00000434278 V9GYY9 64 aa7.03□□□□□ -1.28
LMBR1-208ENST00000434278 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
LMBR1-208ENST00000434278 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
LMBR1-208ENST00000434278 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
LMBR1-208ENST00000434278 Q1T7F1 81 aa6.94□□□□□ -1.3
LMBR1-208ENST00000434278 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
LMBR1-208ENST00000434278 MT4P47944 62 aa6.9□□□□□ -1.3
LMBR1-208ENST00000434278 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
LMBR1-208ENST00000434278 HMCN1Q96RW7 5635 aa6.9□□□□□ -1.31
LMBR1-208ENST00000434278 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
LMBR1-208ENST00000434278 KRTAP5-4Q6L8H1 288 aa6.85□□□□□ -1.31
LMBR1-208ENST00000434278 PSPHP1O15172 72 aa6.84□□□□□ -1.31
LMBR1-208ENST00000434278 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
LMBR1-208ENST00000434278 K7ERS5 55 aa6.73□□□□□ -1.33
LMBR1-208ENST00000434278 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
LMBR1-208ENST00000434278 AHNAK2Q8IVF2 5795 aa6.69□□□□□ -1.34
LMBR1-208ENST00000434278 A6NED7 52 aa6.66□□□□□ -1.34
LMBR1-208ENST00000434278 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
LMBR1-208ENST00000434278 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
LMBR1-208ENST00000434278 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.35
LMBR1-208ENST00000434278 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
LMBR1-208ENST00000434278 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
LMBR1-208ENST00000434278 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
LMBR1-208ENST00000434278 KRTAP20-2Q3LI61 65 aa6.46□□□□□ -1.38
LMBR1-208ENST00000434278 KRTAP5-7Q6L8G8 165 aa6.46□□□□□ -1.38
LMBR1-208ENST00000434278 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
LMBR1-208ENST00000434278 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
LMBR1-208ENST00000434278 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
LMBR1-208ENST00000434278 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
LMBR1-208ENST00000434278 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
LMBR1-208ENST00000434278 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
LMBR1-208ENST00000434278 ROMO1P60602 79 aa6.31□□□□□ -1.4
LMBR1-208ENST00000434278 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
LMBR1-208ENST00000434278 MT1AP04731 61 aa6.12□□□□□ -1.43
LMBR1-208ENST00000434278 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
LMBR1-208ENST00000434278 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
LMBR1-208ENST00000434278 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
LMBR1-208ENST00000434278 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
LMBR1-208ENST00000434278 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
LMBR1-208ENST00000434278 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
LMBR1-208ENST00000434278 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
LMBR1-208ENST00000434278 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
LMBR1-208ENST00000434278 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
LMBR1-208ENST00000434278 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
LMBR1-208ENST00000434278 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
LMBR1-208ENST00000434278 AHNAKQ09666 5890 aaKnown RBP5.65□□□□□ -1.5
LMBR1-208ENST00000434278 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
LMBR1-208ENST00000434278 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
LMBR1-208ENST00000434278 MT3P25713 68 aa5.59□□□□□ -1.51
LMBR1-208ENST00000434278 H3BS24 57 aa5.57□□□□□ -1.52
LMBR1-208ENST00000434278 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
LMBR1-208ENST00000434278 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
LMBR1-208ENST00000434278 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
LMBR1-208ENST00000434278 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
LMBR1-208ENST00000434278 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
LMBR1-208ENST00000434278 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
LMBR1-208ENST00000434278 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
LMBR1-208ENST00000434278 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
LMBR1-208ENST00000434278 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
LMBR1-208ENST00000434278 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
LMBR1-208ENST00000434278 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
LMBR1-208ENST00000434278 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-208ENST00000434278 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
LMBR1-208ENST00000434278 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
LMBR1-208ENST00000434278 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
LMBR1-208ENST00000434278 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
LMBR1-208ENST00000434278 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
LMBR1-208ENST00000434278 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
LMBR1-208ENST00000434278 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
LMBR1-208ENST00000434278 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
LMBR1-208ENST00000434278 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
LMBR1-208ENST00000434278 INE1O15225 51 aa3.49□□□□□ -1.85
LMBR1-208ENST00000434278 PRM1P04553 51 aa3.24□□□□□ -1.89
LMBR1-208ENST00000434278 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
LMBR1-208ENST00000434278 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 54.6 ms