RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
FN1-209ENST00000432072 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
FN1-209ENST00000432072 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
FN1-209ENST00000432072 HYDINQ4G0P3 5121 aa3.04□□□□□ -1.92
FN1-209ENST00000432072 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
FN1-209ENST00000432072 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
FN1-209ENST00000432072 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
FN1-209ENST00000432072 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
FN1-209ENST00000432072 HERC2O95714 4834 aa2.95□□□□□ -1.94
FN1-209ENST00000432072 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
FN1-209ENST00000432072 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
FN1-209ENST00000432072 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
FN1-209ENST00000432072 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
FN1-209ENST00000432072 RYR2Q92736 4967 aa2.89□□□□□ -1.95
FN1-209ENST00000432072 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
FN1-209ENST00000432072 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
FN1-209ENST00000432072 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
FN1-209ENST00000432072 PRM1P04553 51 aa2.87□□□□□ -1.95
FN1-209ENST00000432072 MT1AP04731 61 aa2.85□□□□□ -1.95
FN1-209ENST00000432072 KMT2CQ8NEZ4 4911 aaKnown RBP2.84□□□□□ -1.95
FN1-209ENST00000432072 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
FN1-209ENST00000432072 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
FN1-209ENST00000432072 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
FN1-209ENST00000432072 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
FN1-209ENST00000432072 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
FN1-209ENST00000432072 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
FN1-209ENST00000432072 BIRC6Q9NR09 4857 aa2.73□□□□□ -1.97
FN1-209ENST00000432072 HERC1Q15751 4861 aa2.73□□□□□ -1.97
FN1-209ENST00000432072 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
FN1-209ENST00000432072 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
FN1-209ENST00000432072 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
FN1-209ENST00000432072 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
FN1-209ENST00000432072 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
FN1-209ENST00000432072 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
FN1-209ENST00000432072 MUC2Q02817 5179 aa2.42□□□□□ -2.02
FN1-209ENST00000432072 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
FN1-209ENST00000432072 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
FN1-209ENST00000432072 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
FN1-209ENST00000432072 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
FN1-209ENST00000432072 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
FN1-209ENST00000432072 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
FN1-209ENST00000432072 RNF213Q63HN8 5207 aa2.3□□□□□ -2.04
FN1-209ENST00000432072 UBR4Q5T4S7 5183 aa2.25□□□□□ -2.05
FN1-209ENST00000432072 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
FN1-209ENST00000432072 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
FN1-209ENST00000432072 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
FN1-209ENST00000432072 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
FN1-209ENST00000432072 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
FN1-209ENST00000432072 NEBP20929 6669 aa2.18□□□□□ -2.06
FN1-209ENST00000432072 KMT2DO14686 5537 aa2.18□□□□□ -2.06
FN1-209ENST00000432072 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
FN1-209ENST00000432072 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
FN1-209ENST00000432072 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
FN1-209ENST00000432072 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
FN1-209ENST00000432072 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
FN1-209ENST00000432072 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
FN1-209ENST00000432072 USH2AO75445 5202 aa1.96□□□□□ -2.1
FN1-209ENST00000432072 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
FN1-209ENST00000432072 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
FN1-209ENST00000432072 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
FN1-209ENST00000432072 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
FN1-209ENST00000432072 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
FN1-209ENST00000432072 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
FN1-209ENST00000432072 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
FN1-209ENST00000432072 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
FN1-209ENST00000432072 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
FN1-209ENST00000432072 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
FN1-209ENST00000432072 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
FN1-209ENST00000432072 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
FN1-209ENST00000432072 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
FN1-209ENST00000432072 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
FN1-209ENST00000432072 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
FN1-209ENST00000432072 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.21
FN1-209ENST00000432072 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
FN1-209ENST00000432072 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
FN1-209ENST00000432072 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
FN1-209ENST00000432072 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms