RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
PTCD1-204ENST00000430982 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
PTCD1-204ENST00000430982 PCP4P48539 62 aa5.6□□□□□ -1.51
PTCD1-204ENST00000430982 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
PTCD1-204ENST00000430982 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
PTCD1-204ENST00000430982 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
PTCD1-204ENST00000430982 K7ERS5 55 aa5.55□□□□□ -1.52
PTCD1-204ENST00000430982 A6NED7 52 aa5.49□□□□□ -1.53
PTCD1-204ENST00000430982 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
PTCD1-204ENST00000430982 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
PTCD1-204ENST00000430982 MT4P47944 62 aa5.46□□□□□ -1.54
PTCD1-204ENST00000430982 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
PTCD1-204ENST00000430982 MT1GP13640 62 aa5.43□□□□□ -1.54
PTCD1-204ENST00000430982 MT1LQ93083 61 aa5.42□□□□□ -1.54
PTCD1-204ENST00000430982 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
PTCD1-204ENST00000430982 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
PTCD1-204ENST00000430982 MT1MQ8N339 61 aa5.36□□□□□ -1.55
PTCD1-204ENST00000430982 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
PTCD1-204ENST00000430982 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
PTCD1-204ENST00000430982 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
PTCD1-204ENST00000430982 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
PTCD1-204ENST00000430982 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
PTCD1-204ENST00000430982 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
PTCD1-204ENST00000430982 ROMO1P60602 79 aa5.19□□□□□ -1.58
PTCD1-204ENST00000430982 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
PTCD1-204ENST00000430982 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
PTCD1-204ENST00000430982 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
PTCD1-204ENST00000430982 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
PTCD1-204ENST00000430982 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
PTCD1-204ENST00000430982 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
PTCD1-204ENST00000430982 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
PTCD1-204ENST00000430982 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
PTCD1-204ENST00000430982 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
PTCD1-204ENST00000430982 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
PTCD1-204ENST00000430982 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
PTCD1-204ENST00000430982 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
PTCD1-204ENST00000430982 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
PTCD1-204ENST00000430982 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
PTCD1-204ENST00000430982 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
PTCD1-204ENST00000430982 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
PTCD1-204ENST00000430982 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
PTCD1-204ENST00000430982 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
PTCD1-204ENST00000430982 MT1AP04731 61 aa4.61□□□□□ -1.67
PTCD1-204ENST00000430982 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
PTCD1-204ENST00000430982 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
PTCD1-204ENST00000430982 KRTAP5-2Q701N4 177 aa4.58□□□□□ -1.68
PTCD1-204ENST00000430982 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
PTCD1-204ENST00000430982 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
PTCD1-204ENST00000430982 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
PTCD1-204ENST00000430982 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
PTCD1-204ENST00000430982 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
PTCD1-204ENST00000430982 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
PTCD1-204ENST00000430982 MT3P25713 68 aa4.22□□□□□ -1.73
PTCD1-204ENST00000430982 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
PTCD1-204ENST00000430982 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
PTCD1-204ENST00000430982 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
PTCD1-204ENST00000430982 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
PTCD1-204ENST00000430982 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
PTCD1-204ENST00000430982 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
PTCD1-204ENST00000430982 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
PTCD1-204ENST00000430982 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
PTCD1-204ENST00000430982 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
PTCD1-204ENST00000430982 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PTCD1-204ENST00000430982 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
PTCD1-204ENST00000430982 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
PTCD1-204ENST00000430982 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PTCD1-204ENST00000430982 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
PTCD1-204ENST00000430982 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PTCD1-204ENST00000430982 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
PTCD1-204ENST00000430982 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PTCD1-204ENST00000430982 H3BS24 57 aa2.98□□□□□ -1.93
PTCD1-204ENST00000430982 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
PTCD1-204ENST00000430982 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
PTCD1-204ENST00000430982 PRM1P04553 51 aa2.67□□□□□ -1.98
PTCD1-204ENST00000430982 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
PTCD1-204ENST00000430982 INE1O15225 51 aa2.49□□□□□ -2.01
PTCD1-204ENST00000430982 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
PTCD1-204ENST00000430982 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms