RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
CPSF4-203ENST00000430038 KRTAP4-6Q9BYQ5 205 aa5.89□□□□□ -1.47
CPSF4-203ENST00000430038 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
CPSF4-203ENST00000430038 TNP1P09430 55 aa5.84□□□□□ -1.47
CPSF4-203ENST00000430038 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
CPSF4-203ENST00000430038 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
CPSF4-203ENST00000430038 CCDC179H3BU77 68 aa5.7□□□□□ -1.5
CPSF4-203ENST00000430038 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
CPSF4-203ENST00000430038 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
CPSF4-203ENST00000430038 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
CPSF4-203ENST00000430038 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
CPSF4-203ENST00000430038 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
CPSF4-203ENST00000430038 PRR15LQ9BU68 103 aa5.59□□□□□ -1.51
CPSF4-203ENST00000430038 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
CPSF4-203ENST00000430038 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
CPSF4-203ENST00000430038 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
CPSF4-203ENST00000430038 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
CPSF4-203ENST00000430038 UQCR11O14957 56 aa5.47□□□□□ -1.53
CPSF4-203ENST00000430038 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
CPSF4-203ENST00000430038 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
CPSF4-203ENST00000430038 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
CPSF4-203ENST00000430038 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
CPSF4-203ENST00000430038 TMEM258P61165 79 aa5.34□□□□□ -1.55
CPSF4-203ENST00000430038 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
CPSF4-203ENST00000430038 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
CPSF4-203ENST00000430038 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
CPSF4-203ENST00000430038 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
CPSF4-203ENST00000430038 PSPHP1O15172 72 aa5.2□□□□□ -1.58
CPSF4-203ENST00000430038 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
CPSF4-203ENST00000430038 K7ERS5 55 aa5.16□□□□□ -1.58
CPSF4-203ENST00000430038 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
CPSF4-203ENST00000430038 MT1AP04731 61 aa5.14□□□□□ -1.59
CPSF4-203ENST00000430038 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
CPSF4-203ENST00000430038 H3BS24 57 aa5.13□□□□□ -1.59
CPSF4-203ENST00000430038 PCP4P48539 62 aa5.12□□□□□ -1.59
CPSF4-203ENST00000430038 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
CPSF4-203ENST00000430038 Q1T7F1 81 aa5.1□□□□□ -1.59
CPSF4-203ENST00000430038 V9GYY9 64 aa5.03□□□□□ -1.6
CPSF4-203ENST00000430038 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
CPSF4-203ENST00000430038 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
CPSF4-203ENST00000430038 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
CPSF4-203ENST00000430038 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
CPSF4-203ENST00000430038 A6NED7 52 aa4.93□□□□□ -1.62
CPSF4-203ENST00000430038 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
CPSF4-203ENST00000430038 ROMO1P60602 79 aa4.89□□□□□ -1.63
CPSF4-203ENST00000430038 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
CPSF4-203ENST00000430038 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
CPSF4-203ENST00000430038 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
CPSF4-203ENST00000430038 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
CPSF4-203ENST00000430038 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
CPSF4-203ENST00000430038 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
CPSF4-203ENST00000430038 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
CPSF4-203ENST00000430038 MT3P25713 68 aa4.68□□□□□ -1.66
CPSF4-203ENST00000430038 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
CPSF4-203ENST00000430038 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CPSF4-203ENST00000430038 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
CPSF4-203ENST00000430038 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
CPSF4-203ENST00000430038 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
CPSF4-203ENST00000430038 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
CPSF4-203ENST00000430038 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
CPSF4-203ENST00000430038 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
CPSF4-203ENST00000430038 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
CPSF4-203ENST00000430038 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
CPSF4-203ENST00000430038 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CPSF4-203ENST00000430038 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
CPSF4-203ENST00000430038 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
CPSF4-203ENST00000430038 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
CPSF4-203ENST00000430038 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
CPSF4-203ENST00000430038 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CPSF4-203ENST00000430038 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
CPSF4-203ENST00000430038 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
CPSF4-203ENST00000430038 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
CPSF4-203ENST00000430038 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CPSF4-203ENST00000430038 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
CPSF4-203ENST00000430038 INE1O15225 51 aa2.75□□□□□ -1.97
CPSF4-203ENST00000430038 PRM1P04553 51 aa2.53□□□□□ -2
CPSF4-203ENST00000430038 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CPSF4-203ENST00000430038 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms