RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 NDUFA1O15239 70 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 CRIP1P50238 77 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 LINC00158P58513 81 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 LINC01556Q5JQF7 62 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 CLPSL2Q6UWE3 100 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 TOMM7Q9P0U1 55 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 MYCBP2O75592 4640 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 HSPG2P98160 4391 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 LRP1Q07954 4544 aaKnown RBP0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 FAT1Q14517 4588 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 ETDCA0A1B0GVM5 59 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 H0YAA0 97 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 K7EMI3 77 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 PLNP26678 52 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 WFDC10BQ8IUB3 73 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 DEFB104AQ8WTQ1 72 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 SMIM2Q9BVW6 85 aa0.44□□□□□ -2.34
HMGB1P9-201ENST00000429856 A8MTW9 85 aa0.43□□□□□ -2.34
HMGB1P9-201ENST00000429856 DEFB1P60022 68 aa0.43□□□□□ -2.34
HMGB1P9-201ENST00000429856 RPL39LQ96EH5 51 aaKnown RBP0.43□□□□□ -2.34
HMGB1P9-201ENST00000429856 TNXBP22105 4242 aa0.43□□□□□ -2.34
HMGB1P9-201ENST00000429856 SMIM27A0A1W2PRY6 76 aa0.42□□□□□ -2.34
HMGB1P9-201ENST00000429856 M0QY20 66 aa0.42□□□□□ -2.34
HMGB1P9-201ENST00000429856 RPL39P62891 51 aaKnown RBP0.42□□□□□ -2.34
HMGB1P9-201ENST00000429856 A0A096LNI7 61 aa0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 SMR3BP02814 79 aaPredicted RBP0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 C6orf48Q9UBA6 75 aa0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 PKD1P98161 4303 aa0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 LRP2P98164 4655 aa0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
HMGB1P9-201ENST00000429856 POLR2KP53803 58 aaKnown RBP0.4□□□□□ -2.35
HMGB1P9-201ENST00000429856 RPS29P62273 56 aaKnown RBP0.4□□□□□ -2.35
HMGB1P9-201ENST00000429856 PRLHP81277 87 aa0.4□□□□□ -2.35
HMGB1P9-201ENST00000429856 FLGP20930 4061 aaPredicted RBP0.39□□□□□ -2.35
HMGB1P9-201ENST00000429856 IGIPA6NJ69 53 aa0.39□□□□□ -2.35
HMGB1P9-201ENST00000429856 H0YGX0 51 aa0.39□□□□□ -2.35
HMGB1P9-201ENST00000429856 M0R2T5 61 aa0.39□□□□□ -2.35
HMGB1P9-201ENST00000429856 LINC00308Q8TCZ7 52 aa0.39□□□□□ -2.35
HMGB1P9-201ENST00000429856 C9orf92A6NGG3 77 aa0.38□□□□□ -2.35
HMGB1P9-201ENST00000429856 LINC01546A6NGU7 62 aa0.38□□□□□ -2.35
HMGB1P9-201ENST00000429856 IGLV5-48A0A075B6I7 105 aa0.37□□□□□ -2.35
HMGB1P9-201ENST00000429856 PRM1P04553 51 aa0.37□□□□□ -2.35
HMGB1P9-201ENST00000429856 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
HMGB1P9-201ENST00000429856 S4R3F8 94 aa0.36□□□□□ -2.35
HMGB1P9-201ENST00000429856 LPAP08519 4548 aa0.35□□□□□ -2.35
HMGB1P9-201ENST00000429856 MT1HL1P0DM35 61 aa0.35□□□□□ -2.35
HMGB1P9-201ENST00000429856 MMP24-AS1A0A0U1RRL7 71 aa0.34□□□□□ -2.36
HMGB1P9-201ENST00000429856 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
HMGB1P9-201ENST00000429856 SPRR2EP22531 72 aa0.33□□□□□ -2.36
HMGB1P9-201ENST00000429856 SPRR2DP22532 72 aa0.33□□□□□ -2.36
HMGB1P9-201ENST00000429856 SPRR2BP35325 72 aa0.33□□□□□ -2.36
HMGB1P9-201ENST00000429856 SPRR2AP35326 72 aa0.33□□□□□ -2.36
HMGB1P9-201ENST00000429856 M0QZ58 72 aa0.32□□□□□ -2.36
HMGB1P9-201ENST00000429856 MT1HP80294 61 aa0.31□□□□□ -2.36
HMGB1P9-201ENST00000429856 TNP1P09430 55 aa0.29□□□□□ -2.36
HMGB1P9-201ENST00000429856 MT4P47944 62 aa0.29□□□□□ -2.36
HMGB1P9-201ENST00000429856 MT2AP02795 61 aa0.28□□□□□ -2.36
HMGB1P9-201ENST00000429856 MT1FP04733 61 aa0.28□□□□□ -2.36
HMGB1P9-201ENST00000429856 KRTAP8-1Q8IUC2 63 aa0.28□□□□□ -2.36
HMGB1P9-201ENST00000429856 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
HMGB1P9-201ENST00000429856 SPRR2GQ9BYE4 73 aa0.27□□□□□ -2.37
HMGB1P9-201ENST00000429856 KRTAP19-2Q3LHN2 52 aa0.26□□□□□ -2.37
HMGB1P9-201ENST00000429856 KRTAP19-8Q3LI54 63 aa0.26□□□□□ -2.37
HMGB1P9-201ENST00000429856 MT1BP07438 61 aa0.25□□□□□ -2.37
HMGB1P9-201ENST00000429856 MT1XP80297 61 aa0.24□□□□□ -2.37
HMGB1P9-201ENST00000429856 MT1EP04732 61 aa0.23□□□□□ -2.37
HMGB1P9-201ENST00000429856 MT1GP13640 62 aa0.23□□□□□ -2.37
HMGB1P9-201ENST00000429856 KRTAP19-5Q3LI72 72 aa0.23□□□□□ -2.37
HMGB1P9-201ENST00000429856 MT1MQ8N339 61 aa0.21□□□□□ -2.38
HMGB1P9-201ENST00000429856 MT1LQ93083 61 aa0.21□□□□□ -2.38
HMGB1P9-201ENST00000429856 MT1AP04731 61 aa0.2□□□□□ -2.38
HMGB1P9-201ENST00000429856 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
HMGB1P9-201ENST00000429856 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
HMGB1P9-201ENST00000429856 KRTAP6-1Q3LI64 71 aa0.17□□□□□ -2.38
HMGB1P9-201ENST00000429856 KRTAP6-2Q3LI66 62 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms