RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
GARNL3-204ENST00000429629 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
GARNL3-204ENST00000429629 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
GARNL3-204ENST00000429629 MT1EP04732 61 aa5.53□□□□□ -1.52
GARNL3-204ENST00000429629 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
GARNL3-204ENST00000429629 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
GARNL3-204ENST00000429629 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
GARNL3-204ENST00000429629 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
GARNL3-204ENST00000429629 ROMO1P60602 79 aa5.46□□□□□ -1.54
GARNL3-204ENST00000429629 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
GARNL3-204ENST00000429629 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
GARNL3-204ENST00000429629 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
GARNL3-204ENST00000429629 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
GARNL3-204ENST00000429629 SPRR2DP22532 72 aa5.42□□□□□ -1.54
GARNL3-204ENST00000429629 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
GARNL3-204ENST00000429629 MT1GP13640 62 aa5.39□□□□□ -1.55
GARNL3-204ENST00000429629 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
GARNL3-204ENST00000429629 MT1LQ93083 61 aa5.34□□□□□ -1.55
GARNL3-204ENST00000429629 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
GARNL3-204ENST00000429629 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
GARNL3-204ENST00000429629 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
GARNL3-204ENST00000429629 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
GARNL3-204ENST00000429629 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
GARNL3-204ENST00000429629 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
GARNL3-204ENST00000429629 MT1MQ8N339 61 aa5.23□□□□□ -1.57
GARNL3-204ENST00000429629 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
GARNL3-204ENST00000429629 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
GARNL3-204ENST00000429629 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
GARNL3-204ENST00000429629 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
GARNL3-204ENST00000429629 PRO0628Q9UI54 55 aa5□□□□□ -1.61
GARNL3-204ENST00000429629 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
GARNL3-204ENST00000429629 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
GARNL3-204ENST00000429629 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
GARNL3-204ENST00000429629 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
GARNL3-204ENST00000429629 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
GARNL3-204ENST00000429629 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
GARNL3-204ENST00000429629 MT4P47944 62 aa4.67□□□□□ -1.66
GARNL3-204ENST00000429629 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
GARNL3-204ENST00000429629 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
GARNL3-204ENST00000429629 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
GARNL3-204ENST00000429629 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
GARNL3-204ENST00000429629 MT1AP04731 61 aa4.56□□□□□ -1.68
GARNL3-204ENST00000429629 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
GARNL3-204ENST00000429629 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
GARNL3-204ENST00000429629 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
GARNL3-204ENST00000429629 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
GARNL3-204ENST00000429629 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
GARNL3-204ENST00000429629 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
GARNL3-204ENST00000429629 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
GARNL3-204ENST00000429629 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
GARNL3-204ENST00000429629 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
GARNL3-204ENST00000429629 MT3P25713 68 aa4.19□□□□□ -1.74
GARNL3-204ENST00000429629 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
GARNL3-204ENST00000429629 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
GARNL3-204ENST00000429629 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
GARNL3-204ENST00000429629 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
GARNL3-204ENST00000429629 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
GARNL3-204ENST00000429629 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
GARNL3-204ENST00000429629 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
GARNL3-204ENST00000429629 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
GARNL3-204ENST00000429629 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
GARNL3-204ENST00000429629 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
GARNL3-204ENST00000429629 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
GARNL3-204ENST00000429629 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
GARNL3-204ENST00000429629 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
GARNL3-204ENST00000429629 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
GARNL3-204ENST00000429629 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
GARNL3-204ENST00000429629 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
GARNL3-204ENST00000429629 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
GARNL3-204ENST00000429629 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
GARNL3-204ENST00000429629 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
GARNL3-204ENST00000429629 INE1O15225 51 aa2.96□□□□□ -1.94
GARNL3-204ENST00000429629 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
GARNL3-204ENST00000429629 PRM1P04553 51 aa2.77□□□□□ -1.97
GARNL3-204ENST00000429629 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
GARNL3-204ENST00000429629 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
GARNL3-204ENST00000429629 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
GARNL3-204ENST00000429629 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 149.1 ms