RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 HERC2O95714 4834 aa3.31□□□□□ -1.88
POLR2J4-202ENST00000427076 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
POLR2J4-202ENST00000427076 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
POLR2J4-202ENST00000427076 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
POLR2J4-202ENST00000427076 LRP2P98164 4655 aa3.26□□□□□ -1.89
POLR2J4-202ENST00000427076 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
POLR2J4-202ENST00000427076 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
POLR2J4-202ENST00000427076 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
POLR2J4-202ENST00000427076 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
POLR2J4-202ENST00000427076 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
POLR2J4-202ENST00000427076 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
POLR2J4-202ENST00000427076 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
POLR2J4-202ENST00000427076 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
POLR2J4-202ENST00000427076 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
POLR2J4-202ENST00000427076 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
POLR2J4-202ENST00000427076 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
POLR2J4-202ENST00000427076 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
POLR2J4-202ENST00000427076 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
POLR2J4-202ENST00000427076 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.9
POLR2J4-202ENST00000427076 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
POLR2J4-202ENST00000427076 MT1AP04731 61 aa3.12□□□□□ -1.91
POLR2J4-202ENST00000427076 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
POLR2J4-202ENST00000427076 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
POLR2J4-202ENST00000427076 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
POLR2J4-202ENST00000427076 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
POLR2J4-202ENST00000427076 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
POLR2J4-202ENST00000427076 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
POLR2J4-202ENST00000427076 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
POLR2J4-202ENST00000427076 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
POLR2J4-202ENST00000427076 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
POLR2J4-202ENST00000427076 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
POLR2J4-202ENST00000427076 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
POLR2J4-202ENST00000427076 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.94
POLR2J4-202ENST00000427076 HMCN2Q8NDA2 5059 aa2.89□□□□□ -1.95
POLR2J4-202ENST00000427076 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
POLR2J4-202ENST00000427076 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
POLR2J4-202ENST00000427076 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.95
POLR2J4-202ENST00000427076 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.95
POLR2J4-202ENST00000427076 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
POLR2J4-202ENST00000427076 MUC2Q02817 5179 aa2.8□□□□□ -1.96
POLR2J4-202ENST00000427076 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
POLR2J4-202ENST00000427076 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
POLR2J4-202ENST00000427076 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
POLR2J4-202ENST00000427076 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
POLR2J4-202ENST00000427076 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
POLR2J4-202ENST00000427076 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
POLR2J4-202ENST00000427076 USH2AO75445 5202 aa2.57□□□□□ -2
POLR2J4-202ENST00000427076 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2
POLR2J4-202ENST00000427076 KMT2DO14686 5537 aa2.5□□□□□ -2.01
POLR2J4-202ENST00000427076 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
POLR2J4-202ENST00000427076 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
POLR2J4-202ENST00000427076 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
POLR2J4-202ENST00000427076 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
POLR2J4-202ENST00000427076 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
POLR2J4-202ENST00000427076 NEBP20929 6669 aa2.26□□□□□ -2.05
POLR2J4-202ENST00000427076 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
POLR2J4-202ENST00000427076 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
POLR2J4-202ENST00000427076 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
POLR2J4-202ENST00000427076 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
POLR2J4-202ENST00000427076 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
POLR2J4-202ENST00000427076 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
POLR2J4-202ENST00000427076 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
POLR2J4-202ENST00000427076 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
POLR2J4-202ENST00000427076 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
POLR2J4-202ENST00000427076 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
POLR2J4-202ENST00000427076 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
POLR2J4-202ENST00000427076 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
POLR2J4-202ENST00000427076 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
POLR2J4-202ENST00000427076 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
POLR2J4-202ENST00000427076 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
POLR2J4-202ENST00000427076 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
POLR2J4-202ENST00000427076 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
POLR2J4-202ENST00000427076 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
POLR2J4-202ENST00000427076 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
POLR2J4-202ENST00000427076 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
POLR2J4-202ENST00000427076 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
POLR2J4-202ENST00000427076 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 128.5 ms