RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
NELFE-203ENST00000426722 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
NELFE-203ENST00000426722 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
NELFE-203ENST00000426722 TNP1P09430 55 aa4.44□□□□□ -1.7
NELFE-203ENST00000426722 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
NELFE-203ENST00000426722 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
NELFE-203ENST00000426722 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
NELFE-203ENST00000426722 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
NELFE-203ENST00000426722 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
NELFE-203ENST00000426722 A0A1B0GU69 56 aa4.38□□□□□ -1.71
NELFE-203ENST00000426722 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
NELFE-203ENST00000426722 COX7CP15954 63 aa4.35□□□□□ -1.71
NELFE-203ENST00000426722 A8MU10 97 aa4.34□□□□□ -1.71
NELFE-203ENST00000426722 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
NELFE-203ENST00000426722 H7BZZ5 65 aa4.32□□□□□ -1.72
NELFE-203ENST00000426722 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
NELFE-203ENST00000426722 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
NELFE-203ENST00000426722 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
NELFE-203ENST00000426722 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
NELFE-203ENST00000426722 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
NELFE-203ENST00000426722 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
NELFE-203ENST00000426722 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
NELFE-203ENST00000426722 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
NELFE-203ENST00000426722 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
NELFE-203ENST00000426722 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
NELFE-203ENST00000426722 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
NELFE-203ENST00000426722 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
NELFE-203ENST00000426722 CCDC179H3BU77 68 aa4.08□□□□□ -1.76
NELFE-203ENST00000426722 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
NELFE-203ENST00000426722 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
NELFE-203ENST00000426722 UQCR11O14957 56 aa4.05□□□□□ -1.76
NELFE-203ENST00000426722 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
NELFE-203ENST00000426722 TMEM258P61165 79 aa4□□□□□ -1.77
NELFE-203ENST00000426722 V9GYY9 64 aa4□□□□□ -1.77
NELFE-203ENST00000426722 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
NELFE-203ENST00000426722 K7ERS5 55 aa3.93□□□□□ -1.78
NELFE-203ENST00000426722 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
NELFE-203ENST00000426722 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
NELFE-203ENST00000426722 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
NELFE-203ENST00000426722 MT1AP04731 61 aa3.9□□□□□ -1.79
NELFE-203ENST00000426722 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
NELFE-203ENST00000426722 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
NELFE-203ENST00000426722 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
NELFE-203ENST00000426722 Q1T7F1 81 aa3.76□□□□□ -1.81
NELFE-203ENST00000426722 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
NELFE-203ENST00000426722 PSPHP1O15172 72 aa3.68□□□□□ -1.82
NELFE-203ENST00000426722 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
NELFE-203ENST00000426722 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
NELFE-203ENST00000426722 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
NELFE-203ENST00000426722 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
NELFE-203ENST00000426722 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
NELFE-203ENST00000426722 MT3P25713 68 aa3.65□□□□□ -1.83
NELFE-203ENST00000426722 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
NELFE-203ENST00000426722 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
NELFE-203ENST00000426722 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
NELFE-203ENST00000426722 ROMO1P60602 79 aa3.58□□□□□ -1.84
NELFE-203ENST00000426722 A6NED7 52 aa3.56□□□□□ -1.84
NELFE-203ENST00000426722 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
NELFE-203ENST00000426722 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
NELFE-203ENST00000426722 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
NELFE-203ENST00000426722 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
NELFE-203ENST00000426722 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
NELFE-203ENST00000426722 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
NELFE-203ENST00000426722 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
NELFE-203ENST00000426722 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
NELFE-203ENST00000426722 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
NELFE-203ENST00000426722 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
NELFE-203ENST00000426722 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
NELFE-203ENST00000426722 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
NELFE-203ENST00000426722 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
NELFE-203ENST00000426722 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
NELFE-203ENST00000426722 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
NELFE-203ENST00000426722 INE1O15225 51 aa2.37□□□□□ -2.03
NELFE-203ENST00000426722 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
NELFE-203ENST00000426722 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
NELFE-203ENST00000426722 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
NELFE-203ENST00000426722 PRM1P04553 51 aa1.79□□□□□ -2.12
NELFE-203ENST00000426722 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms