RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 KRTAP4-9Q9BYQ8 210 aa7.62□□□□□ -1.19
CCDC107-206ENST00000426546 DSTQ03001 7570 aaKnown RBP7.57□□□□□ -1.2
CCDC107-206ENST00000426546 KRTAP4-2Q9BYR5 136 aa7.57□□□□□ -1.2
CCDC107-206ENST00000426546 KRTAP19-7Q3SYF9 63 aa7.53□□□□□ -1.2
CCDC107-206ENST00000426546 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
CCDC107-206ENST00000426546 K7ERS5 55 aa7.48□□□□□ -1.21
CCDC107-206ENST00000426546 MT1EP04732 61 aa7.47□□□□□ -1.21
CCDC107-206ENST00000426546 KRTAP19-3Q7Z4W3 81 aa7.45□□□□□ -1.22
CCDC107-206ENST00000426546 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
CCDC107-206ENST00000426546 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
CCDC107-206ENST00000426546 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
CCDC107-206ENST00000426546 MT1GP13640 62 aa7.26□□□□□ -1.25
CCDC107-206ENST00000426546 KRTAP4-11Q9BYQ6 195 aa7.26□□□□□ -1.25
CCDC107-206ENST00000426546 TNP1P09430 55 aa7.24□□□□□ -1.25
CCDC107-206ENST00000426546 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
CCDC107-206ENST00000426546 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
CCDC107-206ENST00000426546 HMCN1Q96RW7 5635 aa7.16□□□□□ -1.26
CCDC107-206ENST00000426546 MT4P47944 62 aa7.16□□□□□ -1.26
CCDC107-206ENST00000426546 LCE4AQ5TA78 99 aa7.16□□□□□ -1.26
CCDC107-206ENST00000426546 KRTAP5-3Q6L8H2 238 aa7.15□□□□□ -1.26
CCDC107-206ENST00000426546 MT1MQ8N339 61 aa7.12□□□□□ -1.27
CCDC107-206ENST00000426546 MT1LQ93083 61 aa7.12□□□□□ -1.27
CCDC107-206ENST00000426546 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
CCDC107-206ENST00000426546 AHNAK2Q8IVF2 5795 aa7.07□□□□□ -1.28
CCDC107-206ENST00000426546 ROMO1P60602 79 aa7.07□□□□□ -1.28
CCDC107-206ENST00000426546 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
CCDC107-206ENST00000426546 KRTAP5-10Q6L8G5 202 aa7.05□□□□□ -1.28
CCDC107-206ENST00000426546 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
CCDC107-206ENST00000426546 KRTAP4-3Q9BYR4 195 aa6.93□□□□□ -1.3
CCDC107-206ENST00000426546 KRTAP5-7Q6L8G8 165 aa6.83□□□□□ -1.32
CCDC107-206ENST00000426546 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
CCDC107-206ENST00000426546 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
CCDC107-206ENST00000426546 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
CCDC107-206ENST00000426546 PRO0628Q9UI54 55 aa6.74□□□□□ -1.33
CCDC107-206ENST00000426546 KRTAP20-2Q3LI61 65 aa6.6□□□□□ -1.35
CCDC107-206ENST00000426546 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
CCDC107-206ENST00000426546 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
CCDC107-206ENST00000426546 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
CCDC107-206ENST00000426546 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
CCDC107-206ENST00000426546 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
CCDC107-206ENST00000426546 PRAC1Q96KF2 57 aa6.42□□□□□ -1.38
CCDC107-206ENST00000426546 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
CCDC107-206ENST00000426546 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
CCDC107-206ENST00000426546 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
CCDC107-206ENST00000426546 MT1AP04731 61 aa6.06□□□□□ -1.44
CCDC107-206ENST00000426546 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
CCDC107-206ENST00000426546 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
CCDC107-206ENST00000426546 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
CCDC107-206ENST00000426546 KRTAP5-8O75690 187 aa5.96□□□□□ -1.46
CCDC107-206ENST00000426546 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
CCDC107-206ENST00000426546 AHNAKQ09666 5890 aaKnown RBP5.9□□□□□ -1.47
CCDC107-206ENST00000426546 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
CCDC107-206ENST00000426546 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
CCDC107-206ENST00000426546 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
CCDC107-206ENST00000426546 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
CCDC107-206ENST00000426546 MT3P25713 68 aa5.55□□□□□ -1.52
CCDC107-206ENST00000426546 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
CCDC107-206ENST00000426546 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
CCDC107-206ENST00000426546 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
CCDC107-206ENST00000426546 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
CCDC107-206ENST00000426546 H3BS24 57 aa4.88□□□□□ -1.63
CCDC107-206ENST00000426546 KRTAP5-11Q6L8G4 156 aa4.84□□□□□ -1.63
CCDC107-206ENST00000426546 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
CCDC107-206ENST00000426546 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
CCDC107-206ENST00000426546 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
CCDC107-206ENST00000426546 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
CCDC107-206ENST00000426546 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
CCDC107-206ENST00000426546 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
CCDC107-206ENST00000426546 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
CCDC107-206ENST00000426546 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
CCDC107-206ENST00000426546 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
CCDC107-206ENST00000426546 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
CCDC107-206ENST00000426546 INE1O15225 51 aa3.95□□□□□ -1.78
CCDC107-206ENST00000426546 PRM1P04553 51 aa3.66□□□□□ -1.82
CCDC107-206ENST00000426546 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
CCDC107-206ENST00000426546 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
CCDC107-206ENST00000426546 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms