RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
RPUSD3-204ENST00000424438 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
RPUSD3-204ENST00000424438 A0A1B0GU33 70 aa5.08□□□□□ -1.6
RPUSD3-204ENST00000424438 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
RPUSD3-204ENST00000424438 SNURFQ9Y675 71 aa5.06□□□□□ -1.6
RPUSD3-204ENST00000424438 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
RPUSD3-204ENST00000424438 COA5Q86WW8 74 aa5.02□□□□□ -1.61
RPUSD3-204ENST00000424438 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
RPUSD3-204ENST00000424438 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
RPUSD3-204ENST00000424438 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
RPUSD3-204ENST00000424438 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
RPUSD3-204ENST00000424438 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
RPUSD3-204ENST00000424438 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
RPUSD3-204ENST00000424438 A8MU10 97 aa4.84□□□□□ -1.63
RPUSD3-204ENST00000424438 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
RPUSD3-204ENST00000424438 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
RPUSD3-204ENST00000424438 K7ERU9 68 aa4.82□□□□□ -1.64
RPUSD3-204ENST00000424438 A0A1B0GU69 56 aa4.76□□□□□ -1.65
RPUSD3-204ENST00000424438 MT1AP04731 61 aa4.69□□□□□ -1.66
RPUSD3-204ENST00000424438 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
RPUSD3-204ENST00000424438 PCP4P48539 62 aa4.67□□□□□ -1.66
RPUSD3-204ENST00000424438 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
RPUSD3-204ENST00000424438 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
RPUSD3-204ENST00000424438 H7BZZ5 65 aa4.59□□□□□ -1.67
RPUSD3-204ENST00000424438 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
RPUSD3-204ENST00000424438 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
RPUSD3-204ENST00000424438 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
RPUSD3-204ENST00000424438 COX7CP15954 63 aa4.53□□□□□ -1.68
RPUSD3-204ENST00000424438 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
RPUSD3-204ENST00000424438 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
RPUSD3-204ENST00000424438 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
RPUSD3-204ENST00000424438 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
RPUSD3-204ENST00000424438 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
RPUSD3-204ENST00000424438 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
RPUSD3-204ENST00000424438 UQCR11O14957 56 aa4.36□□□□□ -1.71
RPUSD3-204ENST00000424438 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
RPUSD3-204ENST00000424438 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
RPUSD3-204ENST00000424438 MT3P25713 68 aa4.31□□□□□ -1.72
RPUSD3-204ENST00000424438 TMEM258P61165 79 aa4.23□□□□□ -1.73
RPUSD3-204ENST00000424438 K7ERS5 55 aa4.22□□□□□ -1.73
RPUSD3-204ENST00000424438 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
RPUSD3-204ENST00000424438 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
RPUSD3-204ENST00000424438 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
RPUSD3-204ENST00000424438 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
RPUSD3-204ENST00000424438 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
RPUSD3-204ENST00000424438 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
RPUSD3-204ENST00000424438 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
RPUSD3-204ENST00000424438 Q1T7F1 81 aa3.89□□□□□ -1.79
RPUSD3-204ENST00000424438 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
RPUSD3-204ENST00000424438 V9GYY9 64 aa3.85□□□□□ -1.79
RPUSD3-204ENST00000424438 ROMO1P60602 79 aa3.82□□□□□ -1.8
RPUSD3-204ENST00000424438 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
RPUSD3-204ENST00000424438 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
RPUSD3-204ENST00000424438 PSPHP1O15172 72 aa3.77□□□□□ -1.81
RPUSD3-204ENST00000424438 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
RPUSD3-204ENST00000424438 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
RPUSD3-204ENST00000424438 A6NED7 52 aa3.65□□□□□ -1.83
RPUSD3-204ENST00000424438 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
RPUSD3-204ENST00000424438 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
RPUSD3-204ENST00000424438 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
RPUSD3-204ENST00000424438 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
RPUSD3-204ENST00000424438 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
RPUSD3-204ENST00000424438 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
RPUSD3-204ENST00000424438 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
RPUSD3-204ENST00000424438 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
RPUSD3-204ENST00000424438 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
RPUSD3-204ENST00000424438 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
RPUSD3-204ENST00000424438 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
RPUSD3-204ENST00000424438 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
RPUSD3-204ENST00000424438 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
RPUSD3-204ENST00000424438 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
RPUSD3-204ENST00000424438 H3BS24 57 aa2.7□□□□□ -1.98
RPUSD3-204ENST00000424438 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
RPUSD3-204ENST00000424438 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
RPUSD3-204ENST00000424438 INE1O15225 51 aa2.29□□□□□ -2.04
RPUSD3-204ENST00000424438 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
RPUSD3-204ENST00000424438 PRM1P04553 51 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 1199.9 ms