RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
CMC1-204ENST00000423894 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
CMC1-204ENST00000423894 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
CMC1-204ENST00000423894 TNP1P09430 55 aa5.06□□□□□ -1.6
CMC1-204ENST00000423894 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
CMC1-204ENST00000423894 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
CMC1-204ENST00000423894 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
CMC1-204ENST00000423894 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
CMC1-204ENST00000423894 PRR15LQ9BU68 103 aa5□□□□□ -1.61
CMC1-204ENST00000423894 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
CMC1-204ENST00000423894 MT4P47944 62 aa4.98□□□□□ -1.61
CMC1-204ENST00000423894 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
CMC1-204ENST00000423894 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CMC1-204ENST00000423894 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
CMC1-204ENST00000423894 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
CMC1-204ENST00000423894 TMEM258P61165 79 aa4.88□□□□□ -1.63
CMC1-204ENST00000423894 UQCR11O14957 56 aa4.87□□□□□ -1.63
CMC1-204ENST00000423894 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
CMC1-204ENST00000423894 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
CMC1-204ENST00000423894 PSPHP1O15172 72 aa4.73□□□□□ -1.65
CMC1-204ENST00000423894 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
CMC1-204ENST00000423894 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
CMC1-204ENST00000423894 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
CMC1-204ENST00000423894 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
CMC1-204ENST00000423894 Q1T7F1 81 aa4.63□□□□□ -1.67
CMC1-204ENST00000423894 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
CMC1-204ENST00000423894 K7ERS5 55 aa4.62□□□□□ -1.67
CMC1-204ENST00000423894 V9GYY9 64 aa4.59□□□□□ -1.67
CMC1-204ENST00000423894 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CMC1-204ENST00000423894 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
CMC1-204ENST00000423894 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
CMC1-204ENST00000423894 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
CMC1-204ENST00000423894 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
CMC1-204ENST00000423894 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
CMC1-204ENST00000423894 A6NED7 52 aa4.5□□□□□ -1.69
CMC1-204ENST00000423894 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
CMC1-204ENST00000423894 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
CMC1-204ENST00000423894 ROMO1P60602 79 aa4.38□□□□□ -1.71
CMC1-204ENST00000423894 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
CMC1-204ENST00000423894 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
CMC1-204ENST00000423894 MT1AP04731 61 aa4.34□□□□□ -1.71
CMC1-204ENST00000423894 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
CMC1-204ENST00000423894 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
CMC1-204ENST00000423894 PCP4P48539 62 aa4.22□□□□□ -1.73
CMC1-204ENST00000423894 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
CMC1-204ENST00000423894 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
CMC1-204ENST00000423894 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
CMC1-204ENST00000423894 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CMC1-204ENST00000423894 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
CMC1-204ENST00000423894 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
CMC1-204ENST00000423894 MT3P25713 68 aa3.95□□□□□ -1.78
CMC1-204ENST00000423894 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
CMC1-204ENST00000423894 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
CMC1-204ENST00000423894 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
CMC1-204ENST00000423894 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CMC1-204ENST00000423894 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
CMC1-204ENST00000423894 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
CMC1-204ENST00000423894 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
CMC1-204ENST00000423894 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
CMC1-204ENST00000423894 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
CMC1-204ENST00000423894 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
CMC1-204ENST00000423894 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
CMC1-204ENST00000423894 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
CMC1-204ENST00000423894 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CMC1-204ENST00000423894 SVIPQ8NHG7 77 aa2.95□□□□□ -1.94
CMC1-204ENST00000423894 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CMC1-204ENST00000423894 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
CMC1-204ENST00000423894 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
CMC1-204ENST00000423894 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
CMC1-204ENST00000423894 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
CMC1-204ENST00000423894 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
CMC1-204ENST00000423894 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
CMC1-204ENST00000423894 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
CMC1-204ENST00000423894 PRM1P04553 51 aa2.28□□□□□ -2.04
CMC1-204ENST00000423894 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CMC1-204ENST00000423894 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
CMC1-204ENST00000423894 INE1O15225 51 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 826.9 ms