RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
UPF3AP3-201ENST00000420996 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
UPF3AP3-201ENST00000420996 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
UPF3AP3-201ENST00000420996 A0A0D9SG42 100 aa6.07□□□□□ -1.44
UPF3AP3-201ENST00000420996 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
UPF3AP3-201ENST00000420996 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
UPF3AP3-201ENST00000420996 SEC61GP60059 68 aa6.06□□□□□ -1.44
UPF3AP3-201ENST00000420996 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
UPF3AP3-201ENST00000420996 A0A1B0GU69 56 aa6.03□□□□□ -1.44
UPF3AP3-201ENST00000420996 A6NED7 52 aa6.03□□□□□ -1.44
UPF3AP3-201ENST00000420996 MT1MQ8N339 61 aa6.02□□□□□ -1.45
UPF3AP3-201ENST00000420996 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
UPF3AP3-201ENST00000420996 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
UPF3AP3-201ENST00000420996 MT1LQ93083 61 aa5.96□□□□□ -1.46
UPF3AP3-201ENST00000420996 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
UPF3AP3-201ENST00000420996 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
UPF3AP3-201ENST00000420996 UQCR11O14957 56 aa5.9□□□□□ -1.46
UPF3AP3-201ENST00000420996 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
UPF3AP3-201ENST00000420996 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
UPF3AP3-201ENST00000420996 A0A1B0GU33 70 aa5.86□□□□□ -1.47
UPF3AP3-201ENST00000420996 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
UPF3AP3-201ENST00000420996 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
UPF3AP3-201ENST00000420996 KRTAP5-7Q6L8G8 165 aa5.82□□□□□ -1.48
UPF3AP3-201ENST00000420996 KRTAP9-9Q9BYP9 154 aa5.82□□□□□ -1.48
UPF3AP3-201ENST00000420996 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
UPF3AP3-201ENST00000420996 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
UPF3AP3-201ENST00000420996 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
UPF3AP3-201ENST00000420996 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
UPF3AP3-201ENST00000420996 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
UPF3AP3-201ENST00000420996 A8MU10 97 aa5.74□□□□□ -1.49
UPF3AP3-201ENST00000420996 K7ERS5 55 aa5.7□□□□□ -1.5
UPF3AP3-201ENST00000420996 TNP1P09430 55 aa5.67□□□□□ -1.5
UPF3AP3-201ENST00000420996 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
UPF3AP3-201ENST00000420996 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
UPF3AP3-201ENST00000420996 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
UPF3AP3-201ENST00000420996 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
UPF3AP3-201ENST00000420996 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
UPF3AP3-201ENST00000420996 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
UPF3AP3-201ENST00000420996 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
UPF3AP3-201ENST00000420996 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
UPF3AP3-201ENST00000420996 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
UPF3AP3-201ENST00000420996 ROMO1P60602 79 aa5.33□□□□□ -1.56
UPF3AP3-201ENST00000420996 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
UPF3AP3-201ENST00000420996 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
UPF3AP3-201ENST00000420996 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
UPF3AP3-201ENST00000420996 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
UPF3AP3-201ENST00000420996 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
UPF3AP3-201ENST00000420996 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
UPF3AP3-201ENST00000420996 MT1AP04731 61 aa5.07□□□□□ -1.6
UPF3AP3-201ENST00000420996 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
UPF3AP3-201ENST00000420996 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
UPF3AP3-201ENST00000420996 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
UPF3AP3-201ENST00000420996 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
UPF3AP3-201ENST00000420996 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
UPF3AP3-201ENST00000420996 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
UPF3AP3-201ENST00000420996 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
UPF3AP3-201ENST00000420996 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
UPF3AP3-201ENST00000420996 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
UPF3AP3-201ENST00000420996 MT3P25713 68 aa4.66□□□□□ -1.66
UPF3AP3-201ENST00000420996 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
UPF3AP3-201ENST00000420996 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
UPF3AP3-201ENST00000420996 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
UPF3AP3-201ENST00000420996 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
UPF3AP3-201ENST00000420996 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
UPF3AP3-201ENST00000420996 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
UPF3AP3-201ENST00000420996 INE1O15225 51 aa3.74□□□□□ -1.81
UPF3AP3-201ENST00000420996 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
UPF3AP3-201ENST00000420996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
UPF3AP3-201ENST00000420996 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
UPF3AP3-201ENST00000420996 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
UPF3AP3-201ENST00000420996 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
UPF3AP3-201ENST00000420996 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
UPF3AP3-201ENST00000420996 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
UPF3AP3-201ENST00000420996 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
UPF3AP3-201ENST00000420996 PRM1P04553 51 aa2.74□□□□□ -1.97
UPF3AP3-201ENST00000420996 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
UPF3AP3-201ENST00000420996 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 101.8 ms