RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 MT1GP13640 62 aa6.85□□□□□ -1.31
LPP-204ENST00000420410 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
LPP-204ENST00000420410 MT1LQ93083 61 aa6.83□□□□□ -1.32
LPP-204ENST00000420410 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
LPP-204ENST00000420410 A6NED7 52 aa6.79□□□□□ -1.32
LPP-204ENST00000420410 MT1MQ8N339 61 aa6.76□□□□□ -1.33
LPP-204ENST00000420410 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
LPP-204ENST00000420410 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
LPP-204ENST00000420410 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
LPP-204ENST00000420410 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
LPP-204ENST00000420410 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
LPP-204ENST00000420410 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
LPP-204ENST00000420410 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
LPP-204ENST00000420410 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
LPP-204ENST00000420410 H3BS24 57 aa6.45□□□□□ -1.38
LPP-204ENST00000420410 ROMO1P60602 79 aa6.44□□□□□ -1.38
LPP-204ENST00000420410 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
LPP-204ENST00000420410 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
LPP-204ENST00000420410 MT4P47944 62 aa6.37□□□□□ -1.39
LPP-204ENST00000420410 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
LPP-204ENST00000420410 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
LPP-204ENST00000420410 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
LPP-204ENST00000420410 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
LPP-204ENST00000420410 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
LPP-204ENST00000420410 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
LPP-204ENST00000420410 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
LPP-204ENST00000420410 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
LPP-204ENST00000420410 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
LPP-204ENST00000420410 GPR98Q8WXG9 6306 aa6.13□□□□□ -1.43
LPP-204ENST00000420410 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
LPP-204ENST00000420410 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
LPP-204ENST00000420410 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
LPP-204ENST00000420410 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
LPP-204ENST00000420410 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
LPP-204ENST00000420410 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
LPP-204ENST00000420410 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
LPP-204ENST00000420410 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
LPP-204ENST00000420410 MT1AP04731 61 aa5.8□□□□□ -1.48
LPP-204ENST00000420410 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
LPP-204ENST00000420410 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
LPP-204ENST00000420410 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
LPP-204ENST00000420410 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
LPP-204ENST00000420410 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
LPP-204ENST00000420410 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
LPP-204ENST00000420410 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
LPP-204ENST00000420410 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
LPP-204ENST00000420410 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
LPP-204ENST00000420410 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
LPP-204ENST00000420410 MT3P25713 68 aa5.29□□□□□ -1.56
LPP-204ENST00000420410 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
LPP-204ENST00000420410 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
LPP-204ENST00000420410 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
LPP-204ENST00000420410 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
LPP-204ENST00000420410 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
LPP-204ENST00000420410 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
LPP-204ENST00000420410 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
LPP-204ENST00000420410 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
LPP-204ENST00000420410 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
LPP-204ENST00000420410 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
LPP-204ENST00000420410 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
LPP-204ENST00000420410 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
LPP-204ENST00000420410 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
LPP-204ENST00000420410 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
LPP-204ENST00000420410 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
LPP-204ENST00000420410 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
LPP-204ENST00000420410 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
LPP-204ENST00000420410 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
LPP-204ENST00000420410 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
LPP-204ENST00000420410 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
LPP-204ENST00000420410 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
LPP-204ENST00000420410 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
LPP-204ENST00000420410 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
LPP-204ENST00000420410 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
LPP-204ENST00000420410 PRM1P04553 51 aa3.33□□□□□ -1.88
LPP-204ENST00000420410 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
LPP-204ENST00000420410 INE1O15225 51 aa3.01□□□□□ -1.93
LPP-204ENST00000420410 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
LPP-204ENST00000420410 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 76.1 ms