RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
CTSA-205ENST00000419493 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
CTSA-205ENST00000419493 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
CTSA-205ENST00000419493 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
CTSA-205ENST00000419493 PSPHP1O15172 72 aa3.68□□□□□ -1.82
CTSA-205ENST00000419493 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
CTSA-205ENST00000419493 A8MU10 97 aa3.66□□□□□ -1.82
CTSA-205ENST00000419493 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
CTSA-205ENST00000419493 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
CTSA-205ENST00000419493 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
CTSA-205ENST00000419493 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
CTSA-205ENST00000419493 MT1EP04732 61 aa3.58□□□□□ -1.84
CTSA-205ENST00000419493 A6NED7 52 aa3.57□□□□□ -1.84
CTSA-205ENST00000419493 TNP1P09430 55 aa3.56□□□□□ -1.84
CTSA-205ENST00000419493 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
CTSA-205ENST00000419493 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
CTSA-205ENST00000419493 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
CTSA-205ENST00000419493 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
CTSA-205ENST00000419493 UQCR11O14957 56 aa3.53□□□□□ -1.84
CTSA-205ENST00000419493 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
CTSA-205ENST00000419493 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
CTSA-205ENST00000419493 MT1GP13640 62 aa3.49□□□□□ -1.85
CTSA-205ENST00000419493 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
CTSA-205ENST00000419493 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
CTSA-205ENST00000419493 MT1LQ93083 61 aa3.43□□□□□ -1.86
CTSA-205ENST00000419493 K7ERS5 55 aa3.42□□□□□ -1.86
CTSA-205ENST00000419493 MT1MQ8N339 61 aa3.41□□□□□ -1.86
CTSA-205ENST00000419493 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
CTSA-205ENST00000419493 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
CTSA-205ENST00000419493 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
CTSA-205ENST00000419493 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
CTSA-205ENST00000419493 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
CTSA-205ENST00000419493 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
CTSA-205ENST00000419493 MT4P47944 62 aa3.3□□□□□ -1.88
CTSA-205ENST00000419493 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
CTSA-205ENST00000419493 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
CTSA-205ENST00000419493 ROMO1P60602 79 aa3.19□□□□□ -1.9
CTSA-205ENST00000419493 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
CTSA-205ENST00000419493 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
CTSA-205ENST00000419493 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
CTSA-205ENST00000419493 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
CTSA-205ENST00000419493 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
CTSA-205ENST00000419493 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
CTSA-205ENST00000419493 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
CTSA-205ENST00000419493 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
CTSA-205ENST00000419493 MT1AP04731 61 aa2.92□□□□□ -1.94
CTSA-205ENST00000419493 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CTSA-205ENST00000419493 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
CTSA-205ENST00000419493 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
CTSA-205ENST00000419493 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
CTSA-205ENST00000419493 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
CTSA-205ENST00000419493 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
CTSA-205ENST00000419493 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
CTSA-205ENST00000419493 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
CTSA-205ENST00000419493 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
CTSA-205ENST00000419493 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
CTSA-205ENST00000419493 MT3P25713 68 aa2.7□□□□□ -1.98
CTSA-205ENST00000419493 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
CTSA-205ENST00000419493 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CTSA-205ENST00000419493 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CTSA-205ENST00000419493 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CTSA-205ENST00000419493 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CTSA-205ENST00000419493 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CTSA-205ENST00000419493 INE1O15225 51 aa2.44□□□□□ -2.02
CTSA-205ENST00000419493 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
CTSA-205ENST00000419493 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
CTSA-205ENST00000419493 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CTSA-205ENST00000419493 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
CTSA-205ENST00000419493 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
CTSA-205ENST00000419493 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
CTSA-205ENST00000419493 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CTSA-205ENST00000419493 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
CTSA-205ENST00000419493 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CTSA-205ENST00000419493 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
CTSA-205ENST00000419493 PRM1P04553 51 aa1.63□□□□□ -2.15
CTSA-205ENST00000419493 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
CTSA-205ENST00000419493 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
CTSA-205ENST00000419493 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms