RNA–Protein interactions for RNA: ENST00000418797.5

ATP1A1-204, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 3

Gene ATP1A1, Length 654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-204ENST00000418797 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
ATP1A1-204ENST00000418797 K7ERS5 55 aa7.33□□□□□ -1.24
ATP1A1-204ENST00000418797 TNP1P09430 55 aa7.25□□□□□ -1.25
ATP1A1-204ENST00000418797 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
ATP1A1-204ENST00000418797 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
ATP1A1-204ENST00000418797 MT1GP13640 62 aa7.22□□□□□ -1.25
ATP1A1-204ENST00000418797 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.26
ATP1A1-204ENST00000418797 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
ATP1A1-204ENST00000418797 PP632Q6XCG6 107 aa7.1□□□□□ -1.27
ATP1A1-204ENST00000418797 MT1MQ8N339 61 aa7.1□□□□□ -1.27
ATP1A1-204ENST00000418797 HMCN1Q96RW7 5635 aa7.1□□□□□ -1.27
ATP1A1-204ENST00000418797 LCE3AQ5TA76 89 aa7.09□□□□□ -1.27
ATP1A1-204ENST00000418797 MT4P47944 62 aa7.07□□□□□ -1.28
ATP1A1-204ENST00000418797 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
ATP1A1-204ENST00000418797 MT1LQ93083 61 aa7.06□□□□□ -1.28
ATP1A1-204ENST00000418797 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
ATP1A1-204ENST00000418797 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
ATP1A1-204ENST00000418797 ROMO1P60602 79 aa6.96□□□□□ -1.3
ATP1A1-204ENST00000418797 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
ATP1A1-204ENST00000418797 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
ATP1A1-204ENST00000418797 KRTAP5-10Q6L8G5 202 aa6.89□□□□□ -1.31
ATP1A1-204ENST00000418797 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
ATP1A1-204ENST00000418797 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
ATP1A1-204ENST00000418797 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
ATP1A1-204ENST00000418797 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
ATP1A1-204ENST00000418797 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
ATP1A1-204ENST00000418797 KRTAP5-7Q6L8G8 165 aa6.64□□□□□ -1.35
ATP1A1-204ENST00000418797 KRTAP20-2Q3LI61 65 aa6.59□□□□□ -1.35
ATP1A1-204ENST00000418797 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
ATP1A1-204ENST00000418797 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
ATP1A1-204ENST00000418797 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
ATP1A1-204ENST00000418797 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
ATP1A1-204ENST00000418797 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
ATP1A1-204ENST00000418797 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
ATP1A1-204ENST00000418797 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
ATP1A1-204ENST00000418797 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
ATP1A1-204ENST00000418797 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
ATP1A1-204ENST00000418797 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
ATP1A1-204ENST00000418797 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
ATP1A1-204ENST00000418797 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
ATP1A1-204ENST00000418797 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
ATP1A1-204ENST00000418797 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
ATP1A1-204ENST00000418797 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
ATP1A1-204ENST00000418797 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
ATP1A1-204ENST00000418797 MT1AP04731 61 aa5.99□□□□□ -1.45
ATP1A1-204ENST00000418797 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
ATP1A1-204ENST00000418797 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
ATP1A1-204ENST00000418797 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
ATP1A1-204ENST00000418797 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
ATP1A1-204ENST00000418797 H3BS24 57 aa5.77□□□□□ -1.49
ATP1A1-204ENST00000418797 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
ATP1A1-204ENST00000418797 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
ATP1A1-204ENST00000418797 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
ATP1A1-204ENST00000418797 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
ATP1A1-204ENST00000418797 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
ATP1A1-204ENST00000418797 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
ATP1A1-204ENST00000418797 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
ATP1A1-204ENST00000418797 MT3P25713 68 aa5.47□□□□□ -1.53
ATP1A1-204ENST00000418797 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
ATP1A1-204ENST00000418797 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
ATP1A1-204ENST00000418797 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
ATP1A1-204ENST00000418797 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
ATP1A1-204ENST00000418797 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
ATP1A1-204ENST00000418797 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
ATP1A1-204ENST00000418797 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
ATP1A1-204ENST00000418797 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
ATP1A1-204ENST00000418797 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
ATP1A1-204ENST00000418797 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
ATP1A1-204ENST00000418797 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
ATP1A1-204ENST00000418797 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
ATP1A1-204ENST00000418797 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
ATP1A1-204ENST00000418797 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
ATP1A1-204ENST00000418797 INE1O15225 51 aa3.72□□□□□ -1.81
ATP1A1-204ENST00000418797 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
ATP1A1-204ENST00000418797 PRM1P04553 51 aa3.59□□□□□ -1.83
ATP1A1-204ENST00000418797 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
ATP1A1-204ENST00000418797 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
ATP1A1-204ENST00000418797 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 92.4 ms