RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
RFC1-203ENST00000418436 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
RFC1-203ENST00000418436 A8MU10 97 aa4.1□□□□□ -1.75
RFC1-203ENST00000418436 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
RFC1-203ENST00000418436 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
RFC1-203ENST00000418436 SPRR2EP22531 72 aa4.05□□□□□ -1.76
RFC1-203ENST00000418436 SPRR2BP35325 72 aa4.05□□□□□ -1.76
RFC1-203ENST00000418436 SPRR2AP35326 72 aa4.05□□□□□ -1.76
RFC1-203ENST00000418436 UQCR11O14957 56 aa4.02□□□□□ -1.77
RFC1-203ENST00000418436 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
RFC1-203ENST00000418436 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
RFC1-203ENST00000418436 Q1T7F1 81 aa3.98□□□□□ -1.77
RFC1-203ENST00000418436 V9GYY9 64 aa3.98□□□□□ -1.77
RFC1-203ENST00000418436 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
RFC1-203ENST00000418436 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
RFC1-203ENST00000418436 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
RFC1-203ENST00000418436 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
RFC1-203ENST00000418436 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
RFC1-203ENST00000418436 PSPHP1O15172 72 aa3.93□□□□□ -1.78
RFC1-203ENST00000418436 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
RFC1-203ENST00000418436 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
RFC1-203ENST00000418436 SPRR2DP22532 72 aa3.91□□□□□ -1.78
RFC1-203ENST00000418436 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
RFC1-203ENST00000418436 MT1EP04732 61 aa3.9□□□□□ -1.79
RFC1-203ENST00000418436 TNP1P09430 55 aa3.9□□□□□ -1.79
RFC1-203ENST00000418436 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
RFC1-203ENST00000418436 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
RFC1-203ENST00000418436 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
RFC1-203ENST00000418436 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
RFC1-203ENST00000418436 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
RFC1-203ENST00000418436 K7ERS5 55 aa3.82□□□□□ -1.8
RFC1-203ENST00000418436 A6NED7 52 aa3.8□□□□□ -1.8
RFC1-203ENST00000418436 MT1GP13640 62 aa3.77□□□□□ -1.81
RFC1-203ENST00000418436 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
RFC1-203ENST00000418436 MT1LQ93083 61 aa3.75□□□□□ -1.81
RFC1-203ENST00000418436 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
RFC1-203ENST00000418436 MT1MQ8N339 61 aa3.71□□□□□ -1.82
RFC1-203ENST00000418436 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
RFC1-203ENST00000418436 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
RFC1-203ENST00000418436 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
RFC1-203ENST00000418436 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
RFC1-203ENST00000418436 ROMO1P60602 79 aa3.61□□□□□ -1.83
RFC1-203ENST00000418436 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
RFC1-203ENST00000418436 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
RFC1-203ENST00000418436 MT4P47944 62 aa3.4□□□□□ -1.87
RFC1-203ENST00000418436 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
RFC1-203ENST00000418436 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
RFC1-203ENST00000418436 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
RFC1-203ENST00000418436 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
RFC1-203ENST00000418436 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
RFC1-203ENST00000418436 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
RFC1-203ENST00000418436 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
RFC1-203ENST00000418436 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
RFC1-203ENST00000418436 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
RFC1-203ENST00000418436 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
RFC1-203ENST00000418436 MT1AP04731 61 aa3.2□□□□□ -1.9
RFC1-203ENST00000418436 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
RFC1-203ENST00000418436 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
RFC1-203ENST00000418436 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
RFC1-203ENST00000418436 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
RFC1-203ENST00000418436 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
RFC1-203ENST00000418436 PRO0628Q9UI54 55 aa3.08□□□□□ -1.92
RFC1-203ENST00000418436 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
RFC1-203ENST00000418436 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
RFC1-203ENST00000418436 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
RFC1-203ENST00000418436 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
RFC1-203ENST00000418436 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
RFC1-203ENST00000418436 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
RFC1-203ENST00000418436 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
RFC1-203ENST00000418436 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
RFC1-203ENST00000418436 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
RFC1-203ENST00000418436 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
RFC1-203ENST00000418436 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
RFC1-203ENST00000418436 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
RFC1-203ENST00000418436 PRM1P04553 51 aa1.84□□□□□ -2.11
RFC1-203ENST00000418436 INE1O15225 51 aa1.77□□□□□ -2.13
RFC1-203ENST00000418436 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
RFC1-203ENST00000418436 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms