RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 K7ERS5 55 aa2.69□□□□□ -1.98
NCL-203ENST00000417652 SPRR2EP22531 72 aa2.69□□□□□ -1.98
NCL-203ENST00000417652 SPRR2BP35325 72 aa2.69□□□□□ -1.98
NCL-203ENST00000417652 SPRR2AP35326 72 aa2.69□□□□□ -1.98
NCL-203ENST00000417652 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
NCL-203ENST00000417652 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
NCL-203ENST00000417652 Q1T7F1 81 aa2.68□□□□□ -1.98
NCL-203ENST00000417652 TNP1P09430 55 aa2.65□□□□□ -1.99
NCL-203ENST00000417652 NEBP20929 6669 aa2.64□□□□□ -1.99
NCL-203ENST00000417652 A6NED7 52 aa2.64□□□□□ -1.99
NCL-203ENST00000417652 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
NCL-203ENST00000417652 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
NCL-203ENST00000417652 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
NCL-203ENST00000417652 SPRR2DP22532 72 aa2.6□□□□□ -1.99
NCL-203ENST00000417652 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
NCL-203ENST00000417652 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
NCL-203ENST00000417652 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
NCL-203ENST00000417652 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
NCL-203ENST00000417652 LCE1EQ5T753 118 aa2.55□□□□□ -2
NCL-203ENST00000417652 LCE3AQ5TA76 89 aa2.55□□□□□ -2
NCL-203ENST00000417652 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
NCL-203ENST00000417652 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
NCL-203ENST00000417652 MT1EP04732 61 aa2.53□□□□□ -2
NCL-203ENST00000417652 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
NCL-203ENST00000417652 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
NCL-203ENST00000417652 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
NCL-203ENST00000417652 CDC42SE1Q9NRR8 79 aa2.51□□□□□ -2.01
NCL-203ENST00000417652 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
NCL-203ENST00000417652 MT1GP13640 62 aa2.47□□□□□ -2.01
NCL-203ENST00000417652 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
NCL-203ENST00000417652 ROMO1P60602 79 aa2.46□□□□□ -2.02
NCL-203ENST00000417652 KTN1-AS1Q86SY8 53 aa2.46□□□□□ -2.02
NCL-203ENST00000417652 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
NCL-203ENST00000417652 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
NCL-203ENST00000417652 MT1LQ93083 61 aa2.44□□□□□ -2.02
NCL-203ENST00000417652 MT1MQ8N339 61 aa2.41□□□□□ -2.02
NCL-203ENST00000417652 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
NCL-203ENST00000417652 MT3P25713 68 aa2.38□□□□□ -2.03
NCL-203ENST00000417652 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
NCL-203ENST00000417652 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
NCL-203ENST00000417652 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
NCL-203ENST00000417652 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
NCL-203ENST00000417652 MT4P47944 62 aa2.27□□□□□ -2.05
NCL-203ENST00000417652 PRAC1Q96KF2 57 aa2.27□□□□□ -2.05
NCL-203ENST00000417652 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
NCL-203ENST00000417652 NDUFAF8A1L188 74 aa2.2□□□□□ -2.06
NCL-203ENST00000417652 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
NCL-203ENST00000417652 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
NCL-203ENST00000417652 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
NCL-203ENST00000417652 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
NCL-203ENST00000417652 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
NCL-203ENST00000417652 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
NCL-203ENST00000417652 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
NCL-203ENST00000417652 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
NCL-203ENST00000417652 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
NCL-203ENST00000417652 MT1AP04731 61 aa2.09□□□□□ -2.07
NCL-203ENST00000417652 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
NCL-203ENST00000417652 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
NCL-203ENST00000417652 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
NCL-203ENST00000417652 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
NCL-203ENST00000417652 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
NCL-203ENST00000417652 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
NCL-203ENST00000417652 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
NCL-203ENST00000417652 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
NCL-203ENST00000417652 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
NCL-203ENST00000417652 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
NCL-203ENST00000417652 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
NCL-203ENST00000417652 INE1O15225 51 aa1.71□□□□□ -2.14
NCL-203ENST00000417652 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
NCL-203ENST00000417652 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
NCL-203ENST00000417652 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
NCL-203ENST00000417652 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
NCL-203ENST00000417652 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
NCL-203ENST00000417652 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
NCL-203ENST00000417652 PRM1P04553 51 aa1.25□□□□□ -2.21
NCL-203ENST00000417652 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
NCL-203ENST00000417652 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
NCL-203ENST00000417652 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms