RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MT2AP02795 61 aa2.81□□□□□ -1.96
ECHDC1-206ENST00000417628 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
ECHDC1-206ENST00000417628 RPL37P61927 97 aaKnown RBP2.8□□□□□ -1.96
ECHDC1-206ENST00000417628 MT1FP04733 61 aa2.79□□□□□ -1.96
ECHDC1-206ENST00000417628 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
ECHDC1-206ENST00000417628 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
ECHDC1-206ENST00000417628 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
ECHDC1-206ENST00000417628 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
ECHDC1-206ENST00000417628 PRLHP81277 87 aa2.75□□□□□ -1.97
ECHDC1-206ENST00000417628 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
ECHDC1-206ENST00000417628 SPRR2EP22531 72 aa2.73□□□□□ -1.97
ECHDC1-206ENST00000417628 SPRR2BP35325 72 aa2.73□□□□□ -1.97
ECHDC1-206ENST00000417628 SPRR2AP35326 72 aa2.73□□□□□ -1.97
ECHDC1-206ENST00000417628 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
ECHDC1-206ENST00000417628 INE1O15225 51 aa2.7□□□□□ -1.98
ECHDC1-206ENST00000417628 SPRR2DP22532 72 aa2.66□□□□□ -1.98
ECHDC1-206ENST00000417628 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
ECHDC1-206ENST00000417628 SPINK1P00995 79 aa2.63□□□□□ -1.99
ECHDC1-206ENST00000417628 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
ECHDC1-206ENST00000417628 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
ECHDC1-206ENST00000417628 S4R3F8 94 aa2.62□□□□□ -1.99
ECHDC1-206ENST00000417628 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
ECHDC1-206ENST00000417628 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
ECHDC1-206ENST00000417628 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
ECHDC1-206ENST00000417628 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
ECHDC1-206ENST00000417628 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
ECHDC1-206ENST00000417628 C9orf92A6NGG3 77 aa2.59□□□□□ -1.99
ECHDC1-206ENST00000417628 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-206ENST00000417628 R4GN34 69 aa2.59□□□□□ -1.99
ECHDC1-206ENST00000417628 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
ECHDC1-206ENST00000417628 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
ECHDC1-206ENST00000417628 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
ECHDC1-206ENST00000417628 KRTAP12-1P59990 96 aa2.53□□□□□ -2
ECHDC1-206ENST00000417628 M0QZ58 72 aa2.51□□□□□ -2.01
ECHDC1-206ENST00000417628 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
ECHDC1-206ENST00000417628 A0A0D9SG42 100 aa2.46□□□□□ -2.02
ECHDC1-206ENST00000417628 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
ECHDC1-206ENST00000417628 KRTAP8-1Q8IUC2 63 aa2.4□□□□□ -2.03
ECHDC1-206ENST00000417628 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
ECHDC1-206ENST00000417628 MT1BP07438 61 aa2.38□□□□□ -2.03
ECHDC1-206ENST00000417628 MT4P47944 62 aa2.36□□□□□ -2.03
ECHDC1-206ENST00000417628 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
ECHDC1-206ENST00000417628 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-206ENST00000417628 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
ECHDC1-206ENST00000417628 KRTAP19-8Q3LI54 63 aa2.28□□□□□ -2.04
ECHDC1-206ENST00000417628 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
ECHDC1-206ENST00000417628 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
ECHDC1-206ENST00000417628 TNP1P09430 55 aa2.22□□□□□ -2.05
ECHDC1-206ENST00000417628 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
ECHDC1-206ENST00000417628 SPRR2GQ9BYE4 73 aa2.19□□□□□ -2.06
ECHDC1-206ENST00000417628 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
ECHDC1-206ENST00000417628 MT1XP80297 61 aa2.08□□□□□ -2.08
ECHDC1-206ENST00000417628 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-206ENST00000417628 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
ECHDC1-206ENST00000417628 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
ECHDC1-206ENST00000417628 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
ECHDC1-206ENST00000417628 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
ECHDC1-206ENST00000417628 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
ECHDC1-206ENST00000417628 MT1EP04732 61 aa1.89□□□□□ -2.11
ECHDC1-206ENST00000417628 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
ECHDC1-206ENST00000417628 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
ECHDC1-206ENST00000417628 MT1GP13640 62 aa1.87□□□□□ -2.11
ECHDC1-206ENST00000417628 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
ECHDC1-206ENST00000417628 KRTAP19-7Q3SYF9 63 aa1.86□□□□□ -2.11
ECHDC1-206ENST00000417628 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
ECHDC1-206ENST00000417628 MT1MQ8N339 61 aa1.84□□□□□ -2.11
ECHDC1-206ENST00000417628 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-206ENST00000417628 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
ECHDC1-206ENST00000417628 MT1LQ93083 61 aa1.7□□□□□ -2.14
ECHDC1-206ENST00000417628 MT1AP04731 61 aa1.58□□□□□ -2.16
ECHDC1-206ENST00000417628 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
ECHDC1-206ENST00000417628 PRM1P04553 51 aa1.53□□□□□ -2.16
ECHDC1-206ENST00000417628 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
ECHDC1-206ENST00000417628 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
ECHDC1-206ENST00000417628 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
ECHDC1-206ENST00000417628 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
ECHDC1-206ENST00000417628 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ECHDC1-206ENST00000417628 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 629.6 ms