RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 MT1LQ93083 61 aa6.35□□□□□ -1.39
CPNE1-210ENST00000416778 MT1MQ8N339 61 aa6.34□□□□□ -1.39
CPNE1-210ENST00000416778 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
CPNE1-210ENST00000416778 TNP1P09430 55 aa6.3□□□□□ -1.4
CPNE1-210ENST00000416778 PSPHP1O15172 72 aa6.27□□□□□ -1.41
CPNE1-210ENST00000416778 UQCR11O14957 56 aa6.26□□□□□ -1.41
CPNE1-210ENST00000416778 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
CPNE1-210ENST00000416778 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
CPNE1-210ENST00000416778 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
CPNE1-210ENST00000416778 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
CPNE1-210ENST00000416778 MT4P47944 62 aa6.16□□□□□ -1.42
CPNE1-210ENST00000416778 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
CPNE1-210ENST00000416778 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
CPNE1-210ENST00000416778 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
CPNE1-210ENST00000416778 A6NED7 52 aa6.06□□□□□ -1.44
CPNE1-210ENST00000416778 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
CPNE1-210ENST00000416778 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
CPNE1-210ENST00000416778 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
CPNE1-210ENST00000416778 AHNAK2Q8IVF2 5795 aa5.97□□□□□ -1.45
CPNE1-210ENST00000416778 K7ERS5 55 aa5.92□□□□□ -1.46
CPNE1-210ENST00000416778 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
CPNE1-210ENST00000416778 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
CPNE1-210ENST00000416778 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
CPNE1-210ENST00000416778 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
CPNE1-210ENST00000416778 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
CPNE1-210ENST00000416778 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
CPNE1-210ENST00000416778 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
CPNE1-210ENST00000416778 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
CPNE1-210ENST00000416778 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
CPNE1-210ENST00000416778 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
CPNE1-210ENST00000416778 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
CPNE1-210ENST00000416778 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
CPNE1-210ENST00000416778 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
CPNE1-210ENST00000416778 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
CPNE1-210ENST00000416778 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
CPNE1-210ENST00000416778 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
CPNE1-210ENST00000416778 ROMO1P60602 79 aa5.65□□□□□ -1.5
CPNE1-210ENST00000416778 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
CPNE1-210ENST00000416778 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
CPNE1-210ENST00000416778 KTN1-AS1Q86SY8 53 aa5.4□□□□□ -1.54
CPNE1-210ENST00000416778 MT1AP04731 61 aa5.39□□□□□ -1.55
CPNE1-210ENST00000416778 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
CPNE1-210ENST00000416778 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
CPNE1-210ENST00000416778 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
CPNE1-210ENST00000416778 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
CPNE1-210ENST00000416778 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
CPNE1-210ENST00000416778 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
CPNE1-210ENST00000416778 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
CPNE1-210ENST00000416778 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
CPNE1-210ENST00000416778 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
CPNE1-210ENST00000416778 MT3P25713 68 aa4.95□□□□□ -1.62
CPNE1-210ENST00000416778 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
CPNE1-210ENST00000416778 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
CPNE1-210ENST00000416778 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
CPNE1-210ENST00000416778 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
CPNE1-210ENST00000416778 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
CPNE1-210ENST00000416778 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
CPNE1-210ENST00000416778 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
CPNE1-210ENST00000416778 H3BS24 57 aa4.29□□□□□ -1.72
CPNE1-210ENST00000416778 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
CPNE1-210ENST00000416778 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
CPNE1-210ENST00000416778 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
CPNE1-210ENST00000416778 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CPNE1-210ENST00000416778 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
CPNE1-210ENST00000416778 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CPNE1-210ENST00000416778 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
CPNE1-210ENST00000416778 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
CPNE1-210ENST00000416778 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
CPNE1-210ENST00000416778 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CPNE1-210ENST00000416778 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CPNE1-210ENST00000416778 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
CPNE1-210ENST00000416778 INE1O15225 51 aa3.52□□□□□ -1.85
CPNE1-210ENST00000416778 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
CPNE1-210ENST00000416778 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
CPNE1-210ENST00000416778 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CPNE1-210ENST00000416778 PRM1P04553 51 aa2.92□□□□□ -1.94
CPNE1-210ENST00000416778 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
CPNE1-210ENST00000416778 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms