RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
UBXN4-202ENST00000415164 A8MU10 97 aa6.54□□□□□ -1.36
UBXN4-202ENST00000415164 KRTAP5-7Q6L8G8 165 aa6.54□□□□□ -1.36
UBXN4-202ENST00000415164 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
UBXN4-202ENST00000415164 A0A1B0GU69 56 aa6.47□□□□□ -1.37
UBXN4-202ENST00000415164 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
UBXN4-202ENST00000415164 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
UBXN4-202ENST00000415164 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
UBXN4-202ENST00000415164 COX7CP15954 63 aa6.31□□□□□ -1.4
UBXN4-202ENST00000415164 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
UBXN4-202ENST00000415164 H7BZZ5 65 aa6.3□□□□□ -1.4
UBXN4-202ENST00000415164 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
UBXN4-202ENST00000415164 SYNE1Q8NF91 8797 aaKnown RBP6.27□□□□□ -1.41
UBXN4-202ENST00000415164 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
UBXN4-202ENST00000415164 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
UBXN4-202ENST00000415164 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
UBXN4-202ENST00000415164 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
UBXN4-202ENST00000415164 H3BS24 57 aa6□□□□□ -1.45
UBXN4-202ENST00000415164 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
UBXN4-202ENST00000415164 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
UBXN4-202ENST00000415164 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
UBXN4-202ENST00000415164 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
UBXN4-202ENST00000415164 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
UBXN4-202ENST00000415164 UQCR11O14957 56 aa5.91□□□□□ -1.46
UBXN4-202ENST00000415164 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
UBXN4-202ENST00000415164 TMEM258P61165 79 aa5.86□□□□□ -1.47
UBXN4-202ENST00000415164 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
UBXN4-202ENST00000415164 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
UBXN4-202ENST00000415164 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
UBXN4-202ENST00000415164 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
UBXN4-202ENST00000415164 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
UBXN4-202ENST00000415164 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
UBXN4-202ENST00000415164 MT1AP04731 61 aa5.8□□□□□ -1.48
UBXN4-202ENST00000415164 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
UBXN4-202ENST00000415164 K7ERS5 55 aa5.77□□□□□ -1.49
UBXN4-202ENST00000415164 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
UBXN4-202ENST00000415164 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
UBXN4-202ENST00000415164 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
UBXN4-202ENST00000415164 PCP4P48539 62 aa5.73□□□□□ -1.49
UBXN4-202ENST00000415164 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
UBXN4-202ENST00000415164 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
UBXN4-202ENST00000415164 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
UBXN4-202ENST00000415164 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
UBXN4-202ENST00000415164 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
UBXN4-202ENST00000415164 V9GYY9 64 aa5.49□□□□□ -1.53
UBXN4-202ENST00000415164 PSPHP1O15172 72 aa5.46□□□□□ -1.54
UBXN4-202ENST00000415164 Q1T7F1 81 aa5.46□□□□□ -1.54
UBXN4-202ENST00000415164 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
UBXN4-202ENST00000415164 MT3P25713 68 aa5.34□□□□□ -1.55
UBXN4-202ENST00000415164 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
UBXN4-202ENST00000415164 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
UBXN4-202ENST00000415164 A6NED7 52 aa5.26□□□□□ -1.57
UBXN4-202ENST00000415164 ROMO1P60602 79 aa5.26□□□□□ -1.57
UBXN4-202ENST00000415164 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
UBXN4-202ENST00000415164 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
UBXN4-202ENST00000415164 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
UBXN4-202ENST00000415164 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
UBXN4-202ENST00000415164 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
UBXN4-202ENST00000415164 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
UBXN4-202ENST00000415164 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
UBXN4-202ENST00000415164 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
UBXN4-202ENST00000415164 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
UBXN4-202ENST00000415164 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
UBXN4-202ENST00000415164 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
UBXN4-202ENST00000415164 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
UBXN4-202ENST00000415164 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
UBXN4-202ENST00000415164 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
UBXN4-202ENST00000415164 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
UBXN4-202ENST00000415164 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
UBXN4-202ENST00000415164 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
UBXN4-202ENST00000415164 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
UBXN4-202ENST00000415164 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
UBXN4-202ENST00000415164 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
UBXN4-202ENST00000415164 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
UBXN4-202ENST00000415164 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
UBXN4-202ENST00000415164 PRM1P04553 51 aa2.69□□□□□ -1.98
UBXN4-202ENST00000415164 INE1O15225 51 aa2.66□□□□□ -1.98
UBXN4-202ENST00000415164 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 87.5 ms