RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
PKP4-203ENST00000411900 K7ERS5 55 aa3.96□□□□□ -1.78
PKP4-203ENST00000411900 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
PKP4-203ENST00000411900 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
PKP4-203ENST00000411900 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
PKP4-203ENST00000411900 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
PKP4-203ENST00000411900 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
PKP4-203ENST00000411900 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
PKP4-203ENST00000411900 ROMO1P60602 79 aa3.84□□□□□ -1.79
PKP4-203ENST00000411900 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
PKP4-203ENST00000411900 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
PKP4-203ENST00000411900 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
PKP4-203ENST00000411900 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
PKP4-203ENST00000411900 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
PKP4-203ENST00000411900 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
PKP4-203ENST00000411900 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
PKP4-203ENST00000411900 MT1EP04732 61 aa3.74□□□□□ -1.81
PKP4-203ENST00000411900 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
PKP4-203ENST00000411900 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
PKP4-203ENST00000411900 TNP1P09430 55 aa3.71□□□□□ -1.82
PKP4-203ENST00000411900 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
PKP4-203ENST00000411900 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
PKP4-203ENST00000411900 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
PKP4-203ENST00000411900 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
PKP4-203ENST00000411900 MT1GP13640 62 aa3.61□□□□□ -1.83
PKP4-203ENST00000411900 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
PKP4-203ENST00000411900 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
PKP4-203ENST00000411900 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
PKP4-203ENST00000411900 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
PKP4-203ENST00000411900 MT1MQ8N339 61 aa3.57□□□□□ -1.84
PKP4-203ENST00000411900 MT1LQ93083 61 aa3.57□□□□□ -1.84
PKP4-203ENST00000411900 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
PKP4-203ENST00000411900 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
PKP4-203ENST00000411900 MT4P47944 62 aa3.52□□□□□ -1.85
PKP4-203ENST00000411900 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
PKP4-203ENST00000411900 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
PKP4-203ENST00000411900 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
PKP4-203ENST00000411900 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
PKP4-203ENST00000411900 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
PKP4-203ENST00000411900 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
PKP4-203ENST00000411900 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
PKP4-203ENST00000411900 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PKP4-203ENST00000411900 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
PKP4-203ENST00000411900 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
PKP4-203ENST00000411900 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
PKP4-203ENST00000411900 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
PKP4-203ENST00000411900 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
PKP4-203ENST00000411900 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
PKP4-203ENST00000411900 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
PKP4-203ENST00000411900 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
PKP4-203ENST00000411900 MT1AP04731 61 aa3.03□□□□□ -1.92
PKP4-203ENST00000411900 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
PKP4-203ENST00000411900 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
PKP4-203ENST00000411900 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
PKP4-203ENST00000411900 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
PKP4-203ENST00000411900 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
PKP4-203ENST00000411900 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
PKP4-203ENST00000411900 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
PKP4-203ENST00000411900 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PKP4-203ENST00000411900 MT3P25713 68 aa2.76□□□□□ -1.97
PKP4-203ENST00000411900 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
PKP4-203ENST00000411900 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
PKP4-203ENST00000411900 LCE1FQ5T754 118 aa2.53□□□□□ -2
PKP4-203ENST00000411900 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
PKP4-203ENST00000411900 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
PKP4-203ENST00000411900 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
PKP4-203ENST00000411900 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
PKP4-203ENST00000411900 INE1O15225 51 aa2.39□□□□□ -2.03
PKP4-203ENST00000411900 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
PKP4-203ENST00000411900 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
PKP4-203ENST00000411900 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
PKP4-203ENST00000411900 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
PKP4-203ENST00000411900 PRM1P04553 51 aa1.99□□□□□ -2.09
PKP4-203ENST00000411900 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
PKP4-203ENST00000411900 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
PKP4-203ENST00000411900 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
PKP4-203ENST00000411900 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
PKP4-203ENST00000411900 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms