RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MT1MQ8N339 61 aa6.28□□□□□ -1.4
LSM5-204ENST00000409909 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
LSM5-204ENST00000409909 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
LSM5-204ENST00000409909 TMEM258P61165 79 aa6.24□□□□□ -1.41
LSM5-204ENST00000409909 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
LSM5-204ENST00000409909 UQCR11O14957 56 aa6.17□□□□□ -1.42
LSM5-204ENST00000409909 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
LSM5-204ENST00000409909 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
LSM5-204ENST00000409909 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
LSM5-204ENST00000409909 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
LSM5-204ENST00000409909 GPR98Q8WXG9 6306 aa6.08□□□□□ -1.44
LSM5-204ENST00000409909 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
LSM5-204ENST00000409909 MT4P47944 62 aa6.04□□□□□ -1.44
LSM5-204ENST00000409909 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
LSM5-204ENST00000409909 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
LSM5-204ENST00000409909 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
LSM5-204ENST00000409909 H3BS24 57 aa5.94□□□□□ -1.46
LSM5-204ENST00000409909 PSPHP1O15172 72 aa5.94□□□□□ -1.46
LSM5-204ENST00000409909 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
LSM5-204ENST00000409909 Q1T7F1 81 aa5.9□□□□□ -1.46
LSM5-204ENST00000409909 V9GYY9 64 aa5.89□□□□□ -1.47
LSM5-204ENST00000409909 K7ERS5 55 aa5.88□□□□□ -1.47
LSM5-204ENST00000409909 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
LSM5-204ENST00000409909 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
LSM5-204ENST00000409909 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
LSM5-204ENST00000409909 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
LSM5-204ENST00000409909 A6NED7 52 aa5.7□□□□□ -1.5
LSM5-204ENST00000409909 KRTAP5-10Q6L8G5 202 aa5.69□□□□□ -1.5
LSM5-204ENST00000409909 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
LSM5-204ENST00000409909 KRTAP20-2Q3LI61 65 aa5.66□□□□□ -1.5
LSM5-204ENST00000409909 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
LSM5-204ENST00000409909 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
LSM5-204ENST00000409909 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
LSM5-204ENST00000409909 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
LSM5-204ENST00000409909 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
LSM5-204ENST00000409909 RPS28P62857 69 aaKnown RBP5.54□□□□□ -1.52
LSM5-204ENST00000409909 ROMO1P60602 79 aa5.53□□□□□ -1.52
LSM5-204ENST00000409909 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
LSM5-204ENST00000409909 KRTAP5-7Q6L8G8 165 aa5.46□□□□□ -1.54
LSM5-204ENST00000409909 PCP4P48539 62 aa5.42□□□□□ -1.54
LSM5-204ENST00000409909 MT1AP04731 61 aa5.35□□□□□ -1.55
LSM5-204ENST00000409909 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
LSM5-204ENST00000409909 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
LSM5-204ENST00000409909 KRTAP5-2Q701N4 177 aa5.26□□□□□ -1.57
LSM5-204ENST00000409909 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
LSM5-204ENST00000409909 KRTAP5-8O75690 187 aa5□□□□□ -1.61
LSM5-204ENST00000409909 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
LSM5-204ENST00000409909 MT3P25713 68 aa4.89□□□□□ -1.63
LSM5-204ENST00000409909 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
LSM5-204ENST00000409909 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
LSM5-204ENST00000409909 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
LSM5-204ENST00000409909 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
LSM5-204ENST00000409909 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
LSM5-204ENST00000409909 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
LSM5-204ENST00000409909 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
LSM5-204ENST00000409909 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
LSM5-204ENST00000409909 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
LSM5-204ENST00000409909 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
LSM5-204ENST00000409909 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
LSM5-204ENST00000409909 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
LSM5-204ENST00000409909 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
LSM5-204ENST00000409909 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
LSM5-204ENST00000409909 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
LSM5-204ENST00000409909 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
LSM5-204ENST00000409909 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
LSM5-204ENST00000409909 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
LSM5-204ENST00000409909 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
LSM5-204ENST00000409909 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
LSM5-204ENST00000409909 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
LSM5-204ENST00000409909 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
LSM5-204ENST00000409909 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
LSM5-204ENST00000409909 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
LSM5-204ENST00000409909 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
LSM5-204ENST00000409909 PRM1P04553 51 aa2.84□□□□□ -1.95
LSM5-204ENST00000409909 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LSM5-204ENST00000409909 INE1O15225 51 aa2.27□□□□□ -2.05
LSM5-204ENST00000409909 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 70.3 ms