RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
PTCD3-203ENST00000409783 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
PTCD3-203ENST00000409783 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
PTCD3-203ENST00000409783 MT1LQ93083 61 aa8□□□□□ -1.13
PTCD3-203ENST00000409783 MT1GP13640 62 aa7.99□□□□□ -1.13
PTCD3-203ENST00000409783 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
PTCD3-203ENST00000409783 KRTAP12-3P60328 96 aa7.92□□□□□ -1.14
PTCD3-203ENST00000409783 MT1MQ8N339 61 aa7.88□□□□□ -1.15
PTCD3-203ENST00000409783 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
PTCD3-203ENST00000409783 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
PTCD3-203ENST00000409783 ROMO1P60602 79 aa7.79□□□□□ -1.16
PTCD3-203ENST00000409783 DSTQ03001 7570 aaKnown RBP7.74□□□□□ -1.17
PTCD3-203ENST00000409783 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
PTCD3-203ENST00000409783 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
PTCD3-203ENST00000409783 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
PTCD3-203ENST00000409783 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
PTCD3-203ENST00000409783 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
PTCD3-203ENST00000409783 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
PTCD3-203ENST00000409783 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
PTCD3-203ENST00000409783 LCE3CQ5T5A8 94 aa7.34□□□□□ -1.23
PTCD3-203ENST00000409783 KRTAP5-4Q6L8H1 288 aa7.34□□□□□ -1.23
PTCD3-203ENST00000409783 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
PTCD3-203ENST00000409783 KRTAP5-5Q701N2 237 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-203ENST00000409783 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
PTCD3-203ENST00000409783 MT4P47944 62 aa7.2□□□□□ -1.26
PTCD3-203ENST00000409783 HMCN1Q96RW7 5635 aa7.13□□□□□ -1.27
PTCD3-203ENST00000409783 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
PTCD3-203ENST00000409783 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
PTCD3-203ENST00000409783 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
PTCD3-203ENST00000409783 KRTAP20-2Q3LI61 65 aa6.88□□□□□ -1.31
PTCD3-203ENST00000409783 SPRR5A0A1B0GTR4 108 aa6.87□□□□□ -1.31
PTCD3-203ENST00000409783 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
PTCD3-203ENST00000409783 SYNE1Q8NF91 8797 aaKnown RBP6.84□□□□□ -1.31
PTCD3-203ENST00000409783 MT1AP04731 61 aa6.81□□□□□ -1.32
PTCD3-203ENST00000409783 PRO0628Q9UI54 55 aa6.79□□□□□ -1.32
PTCD3-203ENST00000409783 KRTAP6-1Q3LI64 71 aa6.76□□□□□ -1.33
PTCD3-203ENST00000409783 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
PTCD3-203ENST00000409783 AHNAK2Q8IVF2 5795 aa6.75□□□□□ -1.33
PTCD3-203ENST00000409783 PRAC1Q96KF2 57 aa6.74□□□□□ -1.33
PTCD3-203ENST00000409783 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
PTCD3-203ENST00000409783 KRTAP5-10Q6L8G5 202 aa6.59□□□□□ -1.35
PTCD3-203ENST00000409783 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
PTCD3-203ENST00000409783 KRTAP5-2Q701N4 177 aa6.5□□□□□ -1.37
PTCD3-203ENST00000409783 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
PTCD3-203ENST00000409783 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
PTCD3-203ENST00000409783 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
PTCD3-203ENST00000409783 MT3P25713 68 aa6.18□□□□□ -1.42
PTCD3-203ENST00000409783 KRTAP4-11Q9BYQ6 195 aa6.18□□□□□ -1.42
PTCD3-203ENST00000409783 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
PTCD3-203ENST00000409783 KRTAP5-8O75690 187 aa5.99□□□□□ -1.45
PTCD3-203ENST00000409783 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
PTCD3-203ENST00000409783 KRTAP5-1Q6L8H4 278 aa5.76□□□□□ -1.49
PTCD3-203ENST00000409783 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
PTCD3-203ENST00000409783 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
PTCD3-203ENST00000409783 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
PTCD3-203ENST00000409783 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
PTCD3-203ENST00000409783 MUC5BQ9HC84 5762 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-203ENST00000409783 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
PTCD3-203ENST00000409783 LCE3DQ9BYE3 92 aa5.34□□□□□ -1.55
PTCD3-203ENST00000409783 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
PTCD3-203ENST00000409783 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
PTCD3-203ENST00000409783 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
PTCD3-203ENST00000409783 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
PTCD3-203ENST00000409783 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
PTCD3-203ENST00000409783 H3BS24 57 aa4.85□□□□□ -1.63
PTCD3-203ENST00000409783 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-203ENST00000409783 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
PTCD3-203ENST00000409783 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
PTCD3-203ENST00000409783 KRTAP21-2Q3LI59 83 aa4.47□□□□□ -1.69
PTCD3-203ENST00000409783 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
PTCD3-203ENST00000409783 PHGR1C9JFL3 82 aa4.04□□□□□ -1.76
PTCD3-203ENST00000409783 PRM1P04553 51 aa4.01□□□□□ -1.77
PTCD3-203ENST00000409783 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
PTCD3-203ENST00000409783 INE1O15225 51 aa3.88□□□□□ -1.79
PTCD3-203ENST00000409783 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
PTCD3-203ENST00000409783 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
PTCD3-203ENST00000409783 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
PTCD3-203ENST00000409783 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms