RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 KRTAP4-8Q9BYQ9 185 aa2.59□□□□□ -1.99
SH3D19-203ENST00000409598 MT4P47944 62 aa2.59□□□□□ -2
SH3D19-203ENST00000409598 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -2
SH3D19-203ENST00000409598 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -2
SH3D19-203ENST00000409598 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
SH3D19-203ENST00000409598 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
SH3D19-203ENST00000409598 MUC17Q685J3 4493 aa2.57□□□□□ -2
SH3D19-203ENST00000409598 LPAP08519 4548 aa2.56□□□□□ -2
SH3D19-203ENST00000409598 FAT4Q6V0I7 4981 aa2.53□□□□□ -2.01
SH3D19-203ENST00000409598 MT1EP04732 61 aa2.52□□□□□ -2.01
SH3D19-203ENST00000409598 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
SH3D19-203ENST00000409598 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
SH3D19-203ENST00000409598 MT1LQ93083 61 aa2.48□□□□□ -2.01
SH3D19-203ENST00000409598 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
SH3D19-203ENST00000409598 MT1MQ8N339 61 aa2.46□□□□□ -2.02
SH3D19-203ENST00000409598 MT3P25713 68 aa2.45□□□□□ -2.02
SH3D19-203ENST00000409598 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
SH3D19-203ENST00000409598 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
SH3D19-203ENST00000409598 NEBP20929 6669 aa2.32□□□□□ -2.04
SH3D19-203ENST00000409598 MUC2Q02817 5179 aa2.3□□□□□ -2.04
SH3D19-203ENST00000409598 KRTAP4-9Q9BYQ8 210 aa2.3□□□□□ -2.04
SH3D19-203ENST00000409598 LCE1DQ5T752 114 aa2.29□□□□□ -2.04
SH3D19-203ENST00000409598 MT1AP04731 61 aa2.29□□□□□ -2.04
SH3D19-203ENST00000409598 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
SH3D19-203ENST00000409598 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
SH3D19-203ENST00000409598 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
SH3D19-203ENST00000409598 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
SH3D19-203ENST00000409598 LCE5AQ5TCM9 118 aa2.24□□□□□ -2.05
SH3D19-203ENST00000409598 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
SH3D19-203ENST00000409598 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
SH3D19-203ENST00000409598 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
SH3D19-203ENST00000409598 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
SH3D19-203ENST00000409598 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
SH3D19-203ENST00000409598 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
SH3D19-203ENST00000409598 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
SH3D19-203ENST00000409598 LCE1FQ5T754 118 aa2.15□□□□□ -2.06
SH3D19-203ENST00000409598 USH2AO75445 5202 aa2.15□□□□□ -2.06
SH3D19-203ENST00000409598 PRM1P04553 51 aa2.14□□□□□ -2.07
SH3D19-203ENST00000409598 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
SH3D19-203ENST00000409598 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
SH3D19-203ENST00000409598 KRTAP9-6A8MVA2 160 aa2.12□□□□□ -2.07
SH3D19-203ENST00000409598 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
SH3D19-203ENST00000409598 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SH3D19-203ENST00000409598 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
SH3D19-203ENST00000409598 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
SH3D19-203ENST00000409598 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
SH3D19-203ENST00000409598 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
SH3D19-203ENST00000409598 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
SH3D19-203ENST00000409598 KMT2DO14686 5537 aa2.01□□□□□ -2.09
SH3D19-203ENST00000409598 KRTAP4-6Q9BYQ5 205 aa2□□□□□ -2.09
SH3D19-203ENST00000409598 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
SH3D19-203ENST00000409598 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
SH3D19-203ENST00000409598 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
SH3D19-203ENST00000409598 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
SH3D19-203ENST00000409598 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
SH3D19-203ENST00000409598 KRTAP4-11Q9BYQ6 195 aa1.84□□□□□ -2.11
SH3D19-203ENST00000409598 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
SH3D19-203ENST00000409598 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
SH3D19-203ENST00000409598 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
SH3D19-203ENST00000409598 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
SH3D19-203ENST00000409598 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
SH3D19-203ENST00000409598 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
SH3D19-203ENST00000409598 KRTAP4-12Q9BQ66 201 aa1.61□□□□□ -2.15
SH3D19-203ENST00000409598 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
SH3D19-203ENST00000409598 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SH3D19-203ENST00000409598 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
SH3D19-203ENST00000409598 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
SH3D19-203ENST00000409598 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
SH3D19-203ENST00000409598 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
SH3D19-203ENST00000409598 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
SH3D19-203ENST00000409598 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
SH3D19-203ENST00000409598 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
SH3D19-203ENST00000409598 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
SH3D19-203ENST00000409598 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
SH3D19-203ENST00000409598 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
SH3D19-203ENST00000409598 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.24
SH3D19-203ENST00000409598 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 130.9 ms