RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 TNP1P09430 55 aa7.86□□□□□ -1.15
KDELR3-202ENST00000409006 LCE4AQ5TA78 99 aa7.86□□□□□ -1.15
KDELR3-202ENST00000409006 MT4P47944 62 aa7.85□□□□□ -1.15
KDELR3-202ENST00000409006 ANAPC13Q9BS18 74 aa7.83□□□□□ -1.16
KDELR3-202ENST00000409006 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
KDELR3-202ENST00000409006 KRTAP5-4Q6L8H1 288 aa7.73□□□□□ -1.17
KDELR3-202ENST00000409006 HMCN1Q96RW7 5635 aa7.72□□□□□ -1.17
KDELR3-202ENST00000409006 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
KDELR3-202ENST00000409006 KRTAP4-2Q9BYR5 136 aa7.65□□□□□ -1.18
KDELR3-202ENST00000409006 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
KDELR3-202ENST00000409006 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
KDELR3-202ENST00000409006 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
KDELR3-202ENST00000409006 AHNAK2Q8IVF2 5795 aa7.52□□□□□ -1.21
KDELR3-202ENST00000409006 KRTAP5-10Q6L8G5 202 aa7.48□□□□□ -1.21
KDELR3-202ENST00000409006 UQCR11O14957 56 aa7.45□□□□□ -1.22
KDELR3-202ENST00000409006 KRTAP5-5Q701N2 237 aaPredicted RBP7.37□□□□□ -1.23
KDELR3-202ENST00000409006 TMEM258P61165 79 aa7.36□□□□□ -1.23
KDELR3-202ENST00000409006 KRTAP4-11Q9BYQ6 195 aa7.33□□□□□ -1.24
KDELR3-202ENST00000409006 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
KDELR3-202ENST00000409006 KRTAP20-2Q3LI61 65 aa7.31□□□□□ -1.24
KDELR3-202ENST00000409006 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
KDELR3-202ENST00000409006 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
KDELR3-202ENST00000409006 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.26
KDELR3-202ENST00000409006 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
KDELR3-202ENST00000409006 KRTAP12-4P60329 112 aa7.15□□□□□ -1.26
KDELR3-202ENST00000409006 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
KDELR3-202ENST00000409006 K7ERS5 55 aa7.11□□□□□ -1.27
KDELR3-202ENST00000409006 PSPHP1O15172 72 aa7.09□□□□□ -1.27
KDELR3-202ENST00000409006 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
KDELR3-202ENST00000409006 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
KDELR3-202ENST00000409006 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
KDELR3-202ENST00000409006 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
KDELR3-202ENST00000409006 Q1T7F1 81 aa6.98□□□□□ -1.29
KDELR3-202ENST00000409006 V9GYY9 64 aa6.97□□□□□ -1.29
KDELR3-202ENST00000409006 KRTAP6-1Q3LI64 71 aa6.8□□□□□ -1.32
KDELR3-202ENST00000409006 A6NED7 52 aa6.79□□□□□ -1.32
KDELR3-202ENST00000409006 MT1AP04731 61 aa6.78□□□□□ -1.32
KDELR3-202ENST00000409006 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
KDELR3-202ENST00000409006 CDC42SE1Q9NRR8 79 aa6.75□□□□□ -1.33
KDELR3-202ENST00000409006 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
KDELR3-202ENST00000409006 ROMO1P60602 79 aa6.66□□□□□ -1.34
KDELR3-202ENST00000409006 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
KDELR3-202ENST00000409006 KRTAP5-8O75690 187 aa6.51□□□□□ -1.37
KDELR3-202ENST00000409006 KRTAP6-2Q3LI66 62 aa6.51□□□□□ -1.37
KDELR3-202ENST00000409006 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
KDELR3-202ENST00000409006 MT3P25713 68 aa6.19□□□□□ -1.42
KDELR3-202ENST00000409006 MUC5ACP98088 5654 aa6.18□□□□□ -1.42
KDELR3-202ENST00000409006 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
KDELR3-202ENST00000409006 AHNAKQ09666 5890 aaKnown RBP6.15□□□□□ -1.43
KDELR3-202ENST00000409006 PCP4P48539 62 aa6.09□□□□□ -1.43
KDELR3-202ENST00000409006 KRTAP5-1Q6L8H4 278 aa6.09□□□□□ -1.43
KDELR3-202ENST00000409006 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
KDELR3-202ENST00000409006 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
KDELR3-202ENST00000409006 LCE1BQ5T7P3 118 aa5.44□□□□□ -1.54
KDELR3-202ENST00000409006 LCE1CQ5T751 118 aa5.32□□□□□ -1.56
KDELR3-202ENST00000409006 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.29□□□□□ -1.56
KDELR3-202ENST00000409006 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
KDELR3-202ENST00000409006 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
KDELR3-202ENST00000409006 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
KDELR3-202ENST00000409006 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
KDELR3-202ENST00000409006 H3BS24 57 aa4.84□□□□□ -1.63
KDELR3-202ENST00000409006 LCE1FQ5T754 118 aa4.71□□□□□ -1.66
KDELR3-202ENST00000409006 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
KDELR3-202ENST00000409006 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
KDELR3-202ENST00000409006 KRTAP21-2Q3LI59 83 aa4.49□□□□□ -1.69
KDELR3-202ENST00000409006 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
KDELR3-202ENST00000409006 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
KDELR3-202ENST00000409006 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
KDELR3-202ENST00000409006 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
KDELR3-202ENST00000409006 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
KDELR3-202ENST00000409006 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
KDELR3-202ENST00000409006 PRM1P04553 51 aa3.43□□□□□ -1.86
KDELR3-202ENST00000409006 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
KDELR3-202ENST00000409006 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
KDELR3-202ENST00000409006 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
KDELR3-202ENST00000409006 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
KDELR3-202ENST00000409006 INE1O15225 51 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 85.9 ms